RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 GEMIN8Q9NWZ8 242 aaKnown RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ST14Q9Y5Y6 855 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 PIEZO2Q9H5I5 2752 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ANKRD36A6QL64 1941 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 IGHV1OR21-1A0A087WYE8 117 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 B4E171 279 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 AGRPO00253 132 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 DDX3XO00571 662 aaKnown RBP eCLIP11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 PPM1DO15297 605 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 FZD6O60353 706 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 SOD1P00441 154 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ZNF30P17039 623 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 AMPD1P23109 780 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 IL1R2P27930 398 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 CSTF2P33240 577 aaKnown RBP eCLIP11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 TSPAN7P41732 249 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ACTR1BP42025 376 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 MMP13P45452 471 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 GPR1P46091 355 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 FASLGP48023 281 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ARSDP51689 593 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 RAB15P59190 212 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ACTR1AP61163 376 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 LRP8Q14114 963 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 TMEM71Q6P5X7 295 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ZNF765Q7L2R6 523 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 TEX26Q8N6G2 289 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 RCBTB1Q8NDN9 531 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 TEKT4Q8WW24 435 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 PIH1D2Q8WWB5 315 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 SLC12A9Q9BXP2 914 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ASPSCR1Q9BZE9 553 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ISCUQ9H1K1 167 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 SLC25A18Q9H1K4 315 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 SUDS3Q9H7L9 328 aaPredicted RBP11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 ETNK2Q9NVF9 386 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 KCNK4Q9NYG8 393 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 PDP2Q9P2J9 529 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 DNPEPQ9ULA0 475 aa11.96□□□□□ -0.49
CBX3P4-202ENST00000540428 GOLGA6CA6NDK9 693 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 CAPN5O15484 640 aaPredicted RBP11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 GOLGA6DP0CG33 693 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 RARAP10276 462 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 UGT1A3P35503 534 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 POLD2P49005 469 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 MAXP61244 160 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 CYP4F2P78329 520 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 PIGHQ14442 188 aaPredicted RBP11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 SMTNL2Q2TAL5 461 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 PYCR3Q53H96 274 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 BORAQ6PGQ7 559 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 TSPAN33Q86UF1 283 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 AOPEPQ8N6M6 819 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 PATE1Q8WXA2 126 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 AP2M1Q96CW1 435 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 ABCG8Q9H221 673 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 GOLGA6AQ9NYA3 693 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 TUBD1Q9UJT1 453 aa11.95□□□□□ -0.5
CBX3P4-202ENST00000540428 SPTA1P02549 2419 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 A0A0J9YYE9 177 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 TRBC1P01850 177 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 PDHA1P08559 390 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 CTPS1P17812 591 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 CES1P23141 567 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 CSF2RBP32927 897 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 KLHL30Q0D2K2 578 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 CLCA4Q14CN2 919 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 FILIP1LQ4L180 1135 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 DCAF12Q5T6F0 453 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 NKAIN2Q5VXU1 208 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 LRRC66Q68CR7 880 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 ALG1LQ6GMV1 187 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 DOK6Q6PKX4 331 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 GALNT13Q8IUC8 556 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 NRSN1Q8IZ57 195 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 SFRP1Q8N474 314 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 IL22RA1Q8N6P7 574 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 NIPA2Q8N8Q9 360 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 EXD1Q8NHP7 514 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 JPH3Q8WXH2 748 aaPredicted RBP11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 HSPH1Q92598 858 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 ART4Q93070 314 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 PMEPA1Q969W9 287 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 COX14Q96I36 57 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 CATSPER2Q96P56 530 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 GBP4Q96PP9 640 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 TEFMQ96QE5 360 aaKnown RBP11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 BPIFA3Q9BQP9 254 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 POLR1EQ9GZS1 481 aaKnown RBP11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 NAT10Q9H0A0 1025 aaKnown RBP11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 MYO1AQ9UBC5 1043 aa11.94□□□□□ -0.5
CBX3P4-202ENST00000540428 AMACRQ9UHK6 382 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms