RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ECEL1O95672 775 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 CER1O95813 267 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 GAS8O95995 478 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 SOD1P00441 154 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 KRT14P02533 472 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 SLC4A1P02730 911 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 PCCBP05166 539 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 SYPP08247 313 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 TSHRP16473 764 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 HMGCLP35914 325 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 TRIM23P36406 574 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 RABIFP47224 123 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 SPINT3P49223 89 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 C21orf59P57076 290 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 DCDC1P59894 354 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 YPEL5P62699 121 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 BASP1P80723 227 aaKnown RBP6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 DPTQ07507 201 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 INPP5AQ14642 412 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 KCNJ11Q14654 390 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 TRIP13Q15645 432 aaPredicted RBP6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF423Q2M1K9 1284 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 KIF19Q2TAC6 998 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 HENMT1Q5T8I9 393 aaKnown RBP6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 Q6ZSR6 202 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 GLT6D1Q7Z4J2 308 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 TMC3Q7Z5M5 1100 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 MINDY1Q8N5J2 469 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 OR2I1PQ8NGU4 316 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 CCHCR1Q8TD31 782 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 BLOC1S5Q8TDH9 187 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 SKA1Q96BD8 255 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 LRRC45Q96CN5 670 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 KLHDC7BQ96G42 594 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 GPR63Q9BZJ6 419 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 ABCG8Q9H221 673 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 GDF3Q9NR23 364 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 DNAAF2Q9NVR5 837 aaKnown RBP6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 PKD2L2Q9NZM6 624 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 HACD3Q9P035 362 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 PCYOX1Q9UHG3 505 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 CD84Q9UIB8 345 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 OR1A2Q9Y585 309 aa6.96□□□□□ -1.3
LPCAT3-209ENST00000540060 SPTY2D1-AS1A0A0U1RR47 76 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 RGSL1A5PLK6 1076 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 E7EVH7 732 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 KIF2AO00139 706 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TMEM63AO94886 807 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TUBB4AP04350 444 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 APRTP07741 180 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF883P0CG24 379 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 MYCLP1P12525 358 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 BPIP17213 487 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TPSB2P20231 275 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TEAD1P28347 426 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 GRIA1P42261 906 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PAFAH1B1P43034 410 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PTGIRP43119 386 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 MAGEA6P43360 314 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 VPS41P49754 854 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF140P52738 457 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 THOP1P52888 689 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 LIMK1P53667 647 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 KIAA1024LP59773 190 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 CDH17Q12864 832 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 GPS1Q13098 491 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PTK6Q13882 451 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PDE1CQ14123 709 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 FZD2Q14332 565 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 NFATC4Q14934 902 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 SHBQ15464 509 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TAF1AQ15573 450 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TPSAB1Q15661 275 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 HLA-BQ31612 363 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 RAET1GQ6H3X3 334 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PNCKQ6P2M8 343 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 IL27RAQ6UWB1 636 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 MACC1Q6ZN28 852 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF534Q76KX8 674 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF572Q7Z3I7 529 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 LINC00523Q86TU6 105 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 NLRP8Q86W28 1048 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PARGQ86W56 976 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 HEATR4Q86WZ0 1026 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 DCP2Q8IU60 420 aaKnown RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 GPR26Q8NDV2 337 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 OR52K1Q8NGK4 314 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 BRSK1Q8TDC3 778 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 NETO1Q8TDF5 533 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 SCAMP4Q969E2 229 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 FUBP1Q96AE4 644 aaKnown RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 AP2M1Q96CW1 435 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 RUNDC3BQ96NL0 473 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PLEKHG4BQ96PX9 1271 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 KCNK17Q96T54 332 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 AGAP2Q99490 1192 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms