RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 CCDC159P0C7I6 412 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 MSL3P1P0C860 447 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 PCNAP12004 261 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 GYS1P13807 737 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 TCF4P15884 667 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 KCNA2P16389 499 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 TNNI1P19237 187 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 MIPP30301 263 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 TM4SF1P30408 202 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 YWHABP31946 246 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 ARRB2P32121 409 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 IDUAP35475 653 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 UGT2B10P36537 528 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DPP6P42658 865 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 NAMPTP43490 491 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CSRP3P50461 194 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 BCAR1P56945 870 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DEFA1P59665 94 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DEFA3P59666 94 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DYNLT1P63172 113 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 PRAMEP78395 509 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 MRPS9P82933 396 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 ECT2LQ008S8 904 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ZNF45Q02386 682 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 GNA12Q03113 381 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 SLC10A2Q12908 348 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 FADDQ13158 208 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 SF3B4Q15427 424 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP28-207ENST00000538475 STILQ15468 1287 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CRY1Q16526 586 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DUSP7Q16829 419 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 UGP2Q16851 508 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 KIZQ2M2Z5 673 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 RFX4Q33E94 735 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 HSDL1Q3SXM5 330 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 LRIT3Q3SXY7 679 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 GLRA4Q5JXX5 417 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 WDR45BQ5MNZ6 344 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 C6orf183Q5T699 404 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 VWA5B1Q5TIE3 1220 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 TDRD10Q5VZ19 366 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 TXNRD3NBQ6F5E7 133 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 FAAH2Q6GMR7 532 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 XAF1Q6GPH4 301 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CYB5RLQ6IPT4 315 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ZNF544Q6NX49 715 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 TATDN1Q6P1N9 297 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 XKRXQ6PP77 449 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CRTC3Q6UUV7 619 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ZNF534Q76KX8 674 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 PTF1AQ7RTS3 328 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 THAP5Q7Z6K1 395 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ADAMTSL2Q86TH1 951 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 HORMAD1Q86X24 394 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 PTRH1Q86Y79 214 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 SCML4Q8N228 414 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 AADATQ8N5Z0 425 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 KIAA1958Q8N8K9 716 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ASCC1Q8N9N2 400 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 GRIN3AQ8TCU5 1115 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 MAPK15Q8TD08 544 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CHURC1Q8WUH1 139 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 JDP2Q8WYK2 163 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 HDAC11Q96DB2 347 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ASB2Q96Q27 587 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DHRS9Q9BPW9 319 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 FEM1AQ9BSK4 669 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 MTG1Q9BT17 334 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 SHCBP1LQ9BZQ2 653 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CEP44Q9C0F1 390 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 SEMA6AQ9H2E6 1030 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ATP13A3Q9H7F0 1226 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 LRRC40Q9H9A6 602 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 NEK6Q9HC98 313 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 SNX15Q9NRS6 342 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 FKBP14Q9NWM8 211 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 RCOR3Q9P2K3 495 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 WRAP73Q9P2S5 460 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 TCEAL9Q9UHQ7 104 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 KIAA1257Q9ULG3 409 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 COPG1Q9Y678 874 aaKnown RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 HSPE1-MOB4S4R3N1 261 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 SCN9AQ15858 1988 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 LTBP4Q8N2S1 1624 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 GBF1Q92538 1859 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 PNMA8CA0A1B0GUJ8 204 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.69□□□□□ -1.34
USP28-207ENST00000538475 TISP43B9A030 160 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 UBXN8O00124 270 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 SDHDO14521 159 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 MRASO14807 208 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 HNRNPDLO14979 420 aaKnown RBP6.69□□□□□ -1.34
USP28-207ENST00000538475 MTSS1O43312 755 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 CHMP2AO43633 222 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 PRPSAP2O60256 369 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 DFNA5O60443 496 aa6.69□□□□□ -1.34
USP28-207ENST00000538475 DAB1O75553 588 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms