RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LCHNA4D1U4 455 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 UBDO15205 165 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 CDK14O94921 469 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 SIX3O95343 332 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-208ENST00000538333 MZF1P28698 734 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-208ENST00000538333 FMO4P31512 558 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 CDH13P55290 713 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 KLC1Q07866 573 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 TWF1Q12792 350 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 CDC16Q13042 620 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 CEACAM7Q14002 265 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 RAB33AQ14088 237 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 IKBKEQ14164 716 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 SQLEQ14534 574 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 TAF12Q16514 161 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 PSAPL1Q6NUJ1 521 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 IZUMO2Q6UXV1 221 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 SLC39A5Q6ZMH5 540 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 GK5Q6ZS86 529 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 PIANPQ8IYJ0 282 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 TTC30BQ8N4P2 665 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 HIPK4Q8NE63 616 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 ADAMTS19Q8TE59 1207 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 EXT2Q93063 718 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 ZNF689Q96CS4 500 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-208ENST00000538333 HERC2P3Q9BVR0 1158 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 SYTL2Q9HCH5 934 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 IKZF3Q9UKT9 509 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 OR51B4Q9Y5P0 310 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 OAS3Q9Y6K5 1087 aaKnown RBP13.97□□□□□ -0.17
LIMK1-208ENST00000538333 DENND4CQ5VZ89 1909 aa13.97□□□□□ -0.17
LIMK1-208ENST00000538333 LRRC14BA6NHZ5 514 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 PPP6CO00743 305 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 KERAO60938 352 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 SRP72O76094 671 aaKnown RBP13.96□□□□□ -0.17
LIMK1-208ENST00000538333 RHOBTB1O94844 696 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 LATS1O95835 1130 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 FGF4P08620 206 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 ENO3P13929 434 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-208ENST00000538333 XRCC1P18887 633 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-208ENST00000538333 ZXDBP98169 803 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 VEPH1Q14D04 833 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 INO80DQ53TQ3 878 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-208ENST00000538333 CNKSR3Q6P9H4 555 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 UCMAQ8WVF2 138 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 C3orf30Q96M34 536 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 ASB2Q96Q27 587 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 CYP2S1Q96SQ9 504 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 NPAS2Q99743 824 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 ECSITQ9BQ95 431 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 ADGRE3Q9BY15 652 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 RC3H2Q9HBD1 1191 aaKnown RBP13.96□□□□□ -0.17
LIMK1-208ENST00000538333 UTP6Q9NYH9 597 aaKnown RBP13.96□□□□□ -0.17
LIMK1-208ENST00000538333 FKBPLQ9UIM3 349 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 FAM50BQ9Y247 325 aa13.96□□□□□ -0.17
LIMK1-208ENST00000538333 A6NHS1 94 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 EIF4E1BA6NMX2 242 aaKnown RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 FZD6O60353 706 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 TBL1XO60907 577 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 NDUFS3O75489 264 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 MBL2P11226 248 aaPredicted RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 RAG1P15918 1043 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 MRPS35P82673 323 aaKnown RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 SMAD3P84022 425 aaKnown RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 TLE2Q04725 743 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 ART3Q13508 389 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 PTPRRQ15256 657 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 PFKFB4Q16877 469 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 Q6ZNB5 142 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 CLYBLQ8N0X4 340 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 TOP1MTQ969P6 601 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 MIEF2Q96C03 454 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 C19orf60Q96EN9 201 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 ALG14Q96F25 216 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 TMEM169Q96HH4 297 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 ZNF334Q9HCZ1 680 aaPredicted RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.18
LIMK1-208ENST00000538333 GALPQ9UBC7 116 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 DNAJC15Q9Y5T4 150 aa13.96□□□□□ -0.18
LIMK1-208ENST00000538333 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 H7C0S8 307 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 PSMD12O00232 456 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 SCAMP3O14828 347 aaKnown RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 CASQ2O14958 399 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 OLFM2O95897 454 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 CD9P21926 228 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 MC4RP32245 332 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 PKNOX1P55347 436 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 FASTKQ14296 549 aaKnown RBP13.95□□□□□ -0.18
LIMK1-208ENST00000538333 PTPRNQ16849 979 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 EML3Q32P44 896 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 TCEAL8Q8IYN2 117 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 STAG3L4Q8TBR4 150 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 WFDC5Q8TCV5 224 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
LIMK1-208ENST00000538333 TOX2Q96NM4 488 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms