RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PRAMEF11O60813 436 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CLASP2O75122 1294 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 COL6A2P12110 1019 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 LEPRP48357 1165 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 PRKAA2P54646 552 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 DBN1Q16643 649 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 DEFB115Q30KQ5 88 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 POM121L1PQ3SYA9 428 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 PARP15Q460N3 678 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SMYD5Q6GMV2 418 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 C19orf60Q96EN9 201 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CNDP1Q96KN2 507 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CASD1Q96PB1 797 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SLC30A3Q99726 388 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 EGFL8Q99944 293 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 CREBZFQ9NS37 354 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 POLR3BQ9NW08 1133 aaPredicted RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 TAS2R13Q9NYV9 303 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 TRMT6Q9UJA5 497 aaKnown RBP8.69□□□□□ -1.02
UBE3B-208ENST00000538070 ATP11BQ9Y2G3 1177 aa8.69□□□□□ -1.02
UBE3B-208ENST00000538070 SLCO1B7G3V0H7 640 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FFAR3O14843 346 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 ANGPT2O15123 496 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 GPR42O15529 346 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 CRTAMO95727 393 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 NDST3O95803 873 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FGF1P05230 155 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UGT1A6P19224 532 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UGT1A1P22309 533 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UGT1A4P22310 534 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UGT1A3P35503 534 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UGT1A5P35504 534 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 GRIA3P42263 894 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 DIO3P55073 304 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FOLH1Q04609 750 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 ACAP2Q15057 778 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UNC50Q53HI1 259 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 IL23RQ5VWK5 629 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 METTL21CQ5VZV1 264 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FAM91A1Q658Y4 838 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 REP15Q6BDI9 236 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 ANKS3Q6ZW76 656 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 PQLC1Q8N2U9 271 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 MDGA1Q8NFP4 955 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 BRSK1Q8TDC3 778 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 LPGAT1Q92604 370 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 ISL2Q96A47 359 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 MTFMTQ96DP5 389 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 LINGO1Q96FE5 620 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TMEM169Q96HH4 297 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 NSMCE3Q96MG7 304 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 PKP2Q99959 881 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 RNF208Q9H0X6 261 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 MFSD1Q9H3U5 465 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 HIPK3Q9H422 1215 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 EPS15L1Q9UBC2 864 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 CIDEBQ9UHD4 219 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 EVLQ9UI08 416 aaPredicted RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 SLC30A1Q9Y6M5 507 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TCAF2A6NFQ2 919 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TARM1B6A8C7 271 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 INSIG1O15503 277 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 VCLP18206 1134 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 HOXC13P31276 330 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TM4SF4P48230 202 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 CCNG1P51959 295 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 CYP4F8P98187 520 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 RAD51Q06609 339 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 BFSP2Q13515 415 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 PTRHD1Q6GMV3 140 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FAM45BPQ6NSW5 357 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FAM45AQ8TCE6 357 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 EEF1AKMT1Q8WVE0 214 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TWIST2Q8WVJ9 160 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 STK39Q9UEW8 545 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 EIF2B4Q9UI10 523 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 CORO1CQ9ULV4 474 aaPredicted RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TDRD15B5MCY1 1934 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 KIF3CO14782 793 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 TIPRLO75663 272 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 VNN2O95498 520 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 PRAMEF12O95522 483 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 SNRPB2P08579 225 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 PFKPQ01813 784 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FOXD4Q12950 439 aaPredicted RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 STX5Q13190 355 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 MTX3Q5HYI7 312 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 RARS2Q5T160 578 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 DNAJC14Q6Y2X3 702 aaPredicted RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 KIAA0408Q6ZU52 694 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 NPAS4Q8IUM7 802 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 LRRC49Q8IUZ0 686 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 FAM110BQ8TC76 370 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 PTCD2Q8WV60 388 aaKnown RBP8.68□□□□□ -1.02
UBE3B-208ENST00000538070 LRTOMTQ8WZ04 291 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 HGH1Q9BTY7 390 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 VCX3BQ9H321 246 aa8.68□□□□□ -1.02
UBE3B-208ENST00000538070 LATS2Q9NRM7 1088 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms