RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TTI1O43156 1089 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 GDF9O60383 454 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 FOXD2O60548 495 aaPredicted RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 MAGEC1O60732 1142 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 SOD1P00441 154 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 BPIP17213 487 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 TPSB2P20231 275 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 TRIM23P36406 574 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 ADCY8P40145 1251 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 YPEL5P62699 121 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 CDK16Q00536 496 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 CDH17Q12864 832 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 PDE1CQ14123 709 aaPredicted RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 PTPRCAPQ14761 206 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 POU6F1Q14863 301 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 TAF1AQ15573 450 aaPredicted RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 TPSAB1Q15661 275 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 WHAMMP3Q1A5X7 153 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 HLA-BQ31612 363 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 AASDHQ4L235 1098 aaPredicted RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 PRAMEF14Q5SWL7 426 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 CERCAMQ5T4B2 595 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 HENMT1Q5T8I9 393 aaKnown RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 ANKRD22Q5VYY1 191 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 ALS2CLQ60I27 953 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 SYDE1Q6ZW31 735 aaPredicted RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 NLRP8Q86W28 1048 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 JAMLQ86YT9 394 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 DCP2Q8IU60 420 aaKnown RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 KIAA2013Q8IYS2 634 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 DNAAF3Q8N9W5 541 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 CPT1BQ92523 772 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 FUBP1Q96AE4 644 aaKnown RBP12.02□□□□□ -0.49
CHD4-203ENST00000535717 APOOQ9BUR5 198 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 FAM83DQ9H4H8 585 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 GDF3Q9NR23 364 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHD4-203ENST00000535717 ASIC3Q9UHC3 531 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 KCTD3Q9Y597 815 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.49
CHD4-203ENST00000535717 SCN8AQ9UQD0 1980 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 SPTY2D1-AS1A0A0U1RR47 76 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 C2orf81A6NN90 581 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 CDX4O14627 284 aaPredicted RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 LDB2O43679 373 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TMEM63AO94886 807 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 CRTAMO95727 393 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TSHRP16473 764 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 LPOP22079 712 aaPredicted RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 IVDP26440 423 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TEAD1P28347 426 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 GPR1P46091 355 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 THOP1P52888 689 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 DCDC1P59894 354 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 MRPS25P82663 173 aaKnown RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 TUBB2AQ13885 445 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 DHX34Q14147 1143 aaKnown RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 FZD2Q14332 565 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 RAET1GQ6H3X3 334 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 IL27RAQ6UWB1 636 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 ADAMTSL4Q6UY14 1074 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 ZNF534Q76KX8 674 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 MINDY1Q8N5J2 469 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 OR4K2Q8NGD2 314 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TRIM51Q9BSJ1 452 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 EDEM2Q9BV94 578 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TUBB2BQ9BVA1 445 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 LGR4Q9BXB1 951 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TEX101Q9BY14 249 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 CDH19Q9H159 772 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 GAREM1Q9H706 876 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 WDR26Q9H7D7 661 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 CAAP1Q9H8G2 361 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 ERVMER34-1Q9H9K5 563 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 IL21RQ9HBE5 538 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 IL26Q9NPH9 171 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 RAD18Q9NS91 495 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 PKP3Q9Y446 797 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 CEP250Q9BV73 2442 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 MYLKQ15746 1914 aa12.01□□□□□ -0.49
CHD4-203ENST00000535717 TP53BP1Q12888 1972 aaPredicted RBP12.01□□□□□ -0.49
CHD4-203ENST00000535717 TMEM131Q92545 1883 aa12□□□□□ -0.49
CHD4-203ENST00000535717 DNAH14Q0VDD8 3507 aa12□□□□□ -0.49
CHD4-203ENST00000535717 FADS2P1A8MWK0 482 aa12□□□□□ -0.49
CHD4-203ENST00000535717 STX7O15400 261 aaKnown RBP12□□□□□ -0.49
CHD4-203ENST00000535717 CER1O95813 267 aa12□□□□□ -0.49
CHD4-203ENST00000535717 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
CHD4-203ENST00000535717 ZNF140P52738 457 aaPredicted RBP12□□□□□ -0.49
CHD4-203ENST00000535717 ATXN3P54252 364 aaPredicted RBP12□□□□□ -0.49
CHD4-203ENST00000535717 SESN2P58004 480 aaPredicted RBP12□□□□□ -0.49
CHD4-203ENST00000535717 KIAA1024LP59773 190 aa12□□□□□ -0.49
CHD4-203ENST00000535717 SEPT6Q14141 434 aa12□□□□□ -0.49
CHD4-203ENST00000535717 PTK2BQ14289 1009 aa12□□□□□ -0.49
CHD4-203ENST00000535717 NFATC4Q14934 902 aa12□□□□□ -0.49
CHD4-203ENST00000535717 CCDC38Q502W7 563 aa12□□□□□ -0.49
CHD4-203ENST00000535717 RNASEH2BQ5TBB1 312 aaKnown RBP12□□□□□ -0.49
CHD4-203ENST00000535717 LRRC8BQ6P9F7 803 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms