RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ZNF670Q9BS34 389 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 THAP2Q9H0W7 228 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RDH14Q9HBH5 336 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 PCDH18Q9HCL0 1135 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RPL26L1Q9UNX3 145 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 FASNP49327 2511 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 ASXL3Q9C0F0 2248 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 TTC24A2A3L6 582 aaPredicted RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 C1QL1O75973 258 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 CEACAM5P06731 702 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 ITIH1P19827 911 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 CCNCP24863 283 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 ADCY8P40145 1251 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 GARSP41250 739 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 MAZP56270 477 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 OR1D5P58170 312 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 CTBSQ01459 385 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 ZFP36L1Q07352 338 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 NR1I3Q14994 352 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 ANKRD20A8PQ5CZ79 823 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 DCAF12Q5T6F0 453 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 ADAMTSL4Q6UY14 1074 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 SLC9B2Q86UD5 537 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 FAM129CQ86XR2 697 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 LPCAT1Q8NF37 534 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 CCL4L1Q8NHW4 92 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 VOPP1Q96AW1 172 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 FRMD8Q9BZ67 464 aaPredicted RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 RMI1Q9H9A7 625 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 SPATS2LQ9NUQ6 558 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 UVRAGQ9P2Y5 699 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 SLC17A4Q9Y2C5 497 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 IGSF10Q6WRI0 2623 aa13.19□□□□□ -0.3
CLSTN3-205ENST00000535452 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 C1orf232A0A0U1RR37 186 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 MATN3O15232 486 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 CAPN5O15484 640 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 EFSO43281 561 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 MTA2O94776 668 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 TRBC1P01850 177 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 FGF1P05230 155 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 CR2P20023 1033 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 AK4P27144 223 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 IL1R2P27930 398 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 FANCCQ00597 558 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 KCNC4Q03721 635 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 NLRP8Q86W28 1048 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 CCDC13Q8IYE1 715 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 TEFMQ96QE5 360 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 MCCC1Q96RQ3 725 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 HERPUD2Q9BSE4 406 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 SEMA6CQ9H3T2 930 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 SLC39A1Q9NY26 324 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 NBEAQ8NFP9 2946 aa13.18□□□□□ -0.3
CLSTN3-205ENST00000535452 A0A1W2PNU3 283 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 RGSL1A5PLK6 1076 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 OR5K4A6NMS3 321 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 INPP4BO15327 924 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CBFA2T2O43439 604 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 AKR1B10O60218 316 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 PPFIA2O75334 1257 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CYP1A2P05177 515 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 LHCGRP22888 699 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 MAPK9P45984 424 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 POLD2P49005 469 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 LIMK2P53671 638 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 HHEXQ03014 270 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 GALNT2Q10471 571 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 NFATC3Q12968 1075 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CYB5D1Q6P9G0 228 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 ZFAND4Q86XD8 727 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 SLITRK4Q8IW52 837 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 PGBD5Q8N414 524 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 TTC9Q92623 222 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 BTBD6Q96KE9 485 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CCDC74BQ96LY2 380 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 NAP1L5Q96NT1 182 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 SRPK1Q96SB4 655 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms