RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TDRD1Q9BXT4 1180 aaKnown RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SPATS2LQ9NUQ6 558 aaKnown RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 TAAR2Q9P1P5 351 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 CD84Q9UIB8 345 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 ATXN7L1Q9ULK2 861 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 SLC17A4Q9Y2C5 497 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 MGAQ8IWI9 3026 aa16.14■□□□□ 0.17
CLSTN3-204ENST00000535313 A0A0U1RQS6 177 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 CAPN8A6NHC0 703 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 RHPN2P1A8MT19 583 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 FGF1P05230 155 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 IVLP07476 585 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 JMJD7P0C870 316 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 KDELR1P24390 212 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 UGT1A5P35504 534 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 POLD2P49005 469 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 RPL26P61254 145 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 SKOR1P84550 965 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 ASTE1Q2TB18 679 aaPredicted RBP16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 ARHGAP40Q5TG30 622 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 SLC30A9Q6PML9 568 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 ADAMTSL4Q6UY14 1074 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 RFLNAQ6ZTI6 216 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 ZNF765Q7L2R6 523 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 NRROSQ86YC3 692 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 JAMLQ86YT9 394 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 NRSN1Q8IZ57 195 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 LPCAT1Q8NF37 534 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 HDAC11Q96DB2 347 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 ABCG8Q9H221 673 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 CPNE5Q9HCH3 593 aa16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 RPL26L1Q9UNX3 145 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-204ENST00000535313 ARHGEF17Q96PE2 2063 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 LRRD1A4D1F6 860 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 FUCA1P04066 466 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 HLA-DQB2P05538 268 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 AK4P27144 223 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 ADCY8P40145 1251 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 STC1P52823 247 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 MAZP56270 477 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 CTBSQ01459 385 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 NIPAL4Q0D2K0 466 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 MAP9Q49MG5 647 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 NLRP8Q86W28 1048 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 SLC35G2Q8TBE7 412 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 LRRN4Q8WUT4 740 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 PTCD2Q8WV60 388 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 SCAMP4Q969E2 229 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 TMEM159Q96B96 161 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 CCDC42Q96M95 316 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 RNF157Q96PX1 679 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 SMIM14Q96QK8 99 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 MAK16Q9BXY0 300 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 CDH19Q9H159 772 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 PCDH9Q9HC56 1237 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 WDR70Q9NW82 654 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 DTLQ9NZJ0 730 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 PISDQ9UG56 409 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 TMEM98Q9Y2Y6 226 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 LOXL2Q9Y4K0 774 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 PCDHGA7Q9Y5G6 932 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 KALRNO60229 2985 aa16.12■□□□□ 0.17
CLSTN3-204ENST00000535313 ERVH48-1M5A8F1 160 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ECEL1O95672 775 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 SOD1P00441 154 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 PRLP01236 227 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 JCHAINP01591 159 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 HGFP14210 728 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ALDH4A1P30038 563 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 SLC5A2P31639 672 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ACTR1BP42025 376 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ARHGAP25P42331 645 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ACTR1AP61163 376 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 RHDQ02161 417 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ZFP36L1Q07352 338 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 VAC14Q08AM6 782 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 C19orf57Q0VDD7 668 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 SLC10A2Q12908 348 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 IHHQ14623 411 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 AMZ1Q400G9 498 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ODF2Q5BJF6 829 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 PHF19Q5T6S3 580 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 PIM3Q86V86 326 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 C17orf82Q86X59 251 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 VSTM4Q8IW00 320 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 RAVER1Q8IY67 606 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 EXD1Q8NHP7 514 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 SCARF2Q96GP6 870 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 OR2M4Q96R27 311 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 CMKLR1Q99788 373 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 ABHD10Q9NUJ1 306 aa16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 AKAP7Q9P0M2 348 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-204ENST00000535313 HEY1Q9Y5J3 304 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms