RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 SKOR1P84550 965 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 AP1B1Q10567 949 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 ILF3Q12906 894 aaKnown RBP eCLIP23.2■■□□□ 1.3
YIF1A-213ENST00000534374 PEX6Q13608 980 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 TAZQ16635 292 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 C14orf28Q4W4Y0 310 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 CERCAMQ5T4B2 595 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 RFLNAQ6ZTI6 216 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 KIAA1524Q8TCG1 905 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 SCAMP4Q969E2 229 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 HIC2Q96JB3 615 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 SLC46A1Q96NT5 459 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 MLPHQ9BV36 600 aaPredicted RBP23.2■■□□□ 1.3
YIF1A-213ENST00000534374 ADGRE3Q9BY15 652 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 LRRN3Q9H3W5 708 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 GOLGA6AQ9NYA3 693 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 CD84Q9UIB8 345 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 SUFUQ9UMX1 484 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 ALG6Q9Y672 507 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 RGSL1A5PLK6 1076 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 SPOPO43791 374 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 NUDT21O43809 227 aaKnown RBP23.19■■□□□ 1.3
YIF1A-213ENST00000534374 CLDN7O95471 211 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 ITPKBP27987 946 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 CD86P42081 329 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 NOP2P46087 812 aaKnown RBP23.19■■□□□ 1.3
YIF1A-213ENST00000534374 CCL7P80098 99 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 ZBTB17Q13105 803 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 HLTFQ14527 1009 aaKnown RBP eCLIP23.19■■□□□ 1.3
YIF1A-213ENST00000534374 QPCTQ16769 361 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 MFSD7Q6UXD7 560 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 C17orf82Q86X59 251 aaPredicted RBP23.19■■□□□ 1.3
YIF1A-213ENST00000534374 NRROSQ86YC3 692 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 RFX6Q8HWS3 928 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 ZNF248Q8NDW4 579 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 LPCAT1Q8NF37 534 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 EXD1Q8NHP7 514 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 WDR36Q8NI36 951 aaKnown RBP23.19■■□□□ 1.3
YIF1A-213ENST00000534374 GFM1Q96RP9 751 aaKnown RBP23.19■■□□□ 1.3
YIF1A-213ENST00000534374 ASCL3Q9NQ33 180 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 THSD1Q9NS62 852 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 SATB2Q9UPW6 733 aa23.19■■□□□ 1.3
YIF1A-213ENST00000534374 A0A1W2PNU3 283 aaPredicted RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 A0A1W2PQM1 296 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 CASC3O15234 703 aaKnown RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 PSTPIP1O43586 416 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 RBMS1P29558 406 aaKnown RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 MLLT3P42568 568 aaPredicted RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 GNPDA1P46926 289 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 PCBP4P57723 403 aaKnown RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 TFDP2Q14188 446 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 NT5DC3Q86UY8 548 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 CCHCR1Q8TD31 782 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 IMP4Q96G21 291 aaKnown RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 PRR11Q96HE9 360 aaPredicted RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 SLC25A51Q9H1U9 297 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 SPATS2LQ9NUQ6 558 aaKnown RBP23.18■■□□□ 1.3
YIF1A-213ENST00000534374 LRIT1Q9P2V4 623 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 HYOU1Q9Y4L1 999 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 PCDHA13Q9Y5I0 950 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 IGSF10Q6WRI0 2623 aa23.18■■□□□ 1.3
YIF1A-213ENST00000534374 CCDC187A0A096LP49 1063 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 A0A0A6YYK5 440 aaPredicted RBP23.17■■□□□ 1.3
YIF1A-213ENST00000534374 FGF1P05230 155 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 RPLP0P05388 317 aaKnown RBP23.17■■□□□ 1.3
YIF1A-213ENST00000534374 TNNT1P13805 278 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 ADCY8P40145 1251 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 CDKN2BP42772 138 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 POLD2P49005 469 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 SPINT3P49223 89 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 PDX1P52945 283 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 SPA17Q15506 151 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 SLC14A2Q15849 920 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 TEX44Q53QW1 395 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 C3orf38Q5JPI3 329 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 NPNTQ6UXI9 565 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 CCNJLQ8IV13 435 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 TADA1Q96BN2 335 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 LIN37Q96GY3 246 aaPredicted RBP23.17■■□□□ 1.3
YIF1A-213ENST00000534374 COX14Q96I36 57 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 RIOK2Q9BVS4 552 aaKnown RBP23.17■■□□□ 1.3
YIF1A-213ENST00000534374 LUC7LQ9NQ29 371 aaKnown RBP23.17■■□□□ 1.3
YIF1A-213ENST00000534374 TAAR2Q9P1P5 351 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 RNF215Q9Y6U7 377 aa23.17■■□□□ 1.3
YIF1A-213ENST00000534374 C1orf232A0A0U1RR37 186 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 B4DGG1 531 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 D6RAR5 112 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 CTBSQ01459 385 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 EIF3IQ13347 325 aaKnown RBP23.16■■□□□ 1.3
YIF1A-213ENST00000534374 ARL14Q8N4G2 192 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 ZDHHC1Q8WTX9 485 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 PTCD2Q8WV60 388 aaKnown RBP23.16■■□□□ 1.3
YIF1A-213ENST00000534374 TMEM74Q96NL1 305 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 AGAP3Q96P47 875 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 AGAP2Q99490 1192 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 FAM83DQ9H4H8 585 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 SYNDIG1Q9H7V2 258 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 PKD2L2Q9NZM6 624 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 TMEM98Q9Y2Y6 226 aa23.16■■□□□ 1.3
YIF1A-213ENST00000534374 LOC400499M0QZD8 3231 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms