RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CHRNA1P02708 482 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 RHOQP17081 205 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 MRPS5P82675 430 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 ITKQ08881 620 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ITGA7Q13683 1181 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TLR1Q15399 786 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 MEDAGQ5VYS4 303 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CYP2R1Q6VVX0 501 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ZCCHC23Q6ZST2 131 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 KCTD8Q6ZWB6 473 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CARM1Q86X55 608 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 FAM131BQ86XD5 332 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 C10orf107Q8IVU9 208 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ZC3H7AQ8IWR0 971 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 CREB3L1Q96BA8 519 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TWNKQ96RR1 684 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 AGAP2Q99490 1192 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 OXCT2Q9BYC2 517 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 CAB39LQ9H9S4 337 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CHST12Q9NRB3 414 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 KLHL11Q9NVR0 708 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 RBM22Q9NW64 420 aaKnown RBP eCLIP4.04□□□□□ -1.76
SOX6-217ENST00000533870 TRPM5Q9NZQ8 1165 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PCDHGB6Q9Y5F9 930 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ANKRD26Q9UPS8 1709 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CNTNAP2Q9UHC6 1331 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TEX51A0A1B0GUA7 166 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ELOVL7A1L3X0 281 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TRIM43BA6NCK2 446 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 MEI4A8MW99 385 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 RGS13O14921 159 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ZBTB39O15060 712 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PPP1R11O60927 126 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 RNASEH2AO75792 299 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 GABARAPO95166 117 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 IFNA7P01567 189 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 EPB42P16452 691 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 GSTM3P21266 225 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 GRIA1P42261 906 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 SCNN1GP51170 649 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PFKPQ01813 784 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 SLC25A11Q02978 314 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 GSTM4Q03013 218 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 UBAP2LQ14157 1087 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 FSTL4Q6MZW2 842 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CASP12Q6UXS9 341 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TMPRSS11AQ6ZMR5 421 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 C1orf52Q8N6N3 182 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 IPMKQ8NFU5 416 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 JOSD2Q8TAC2 188 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 KIAA1143Q96AT1 154 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 FEM1AQ9BSK4 669 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 FICDQ9BVA6 458 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 SEZ6LQ9BYH1 1024 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ACTR6Q9GZN1 396 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 GBA3Q9H227 469 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 C12orf65Q9H3J6 166 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 FBXO44Q9H4M3 255 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TDRD3Q9H7E2 651 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 ACTR8Q9H981 624 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 KCNK13Q9HB14 408 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PAK1IP1Q9NWT1 392 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 CPQQ9Y646 472 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PRR23D1E9PI22 279 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 AQP9O43315 295 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CSPG5O95196 566 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CATP04040 527 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 PRR23D2P0DMB1 279 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 ZNF26P17031 533 aaPredicted RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 RORAP35398 523 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CPOXP36551 454 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ACLYP53396 1101 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 BACE1P56817 501 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TAS2R39P59534 338 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 HSF2Q03933 536 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 GALNT2Q10471 571 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CNTN1Q12860 1018 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CCNIQ14094 377 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 MAPK11Q15759 364 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 SULT1C3Q6IMI6 304 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 BHLHB9Q6PI77 547 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PLEKHG7Q6ZR37 379 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 FRMD7Q6ZUT3 714 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 PAGE2Q7Z2X7 111 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ZC3HC1Q86WB0 502 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 RNF130Q86XS8 419 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 DENND6BQ8NEG7 585 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ABHD11Q8NFV4 315 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 TMEM143Q96AN5 459 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 ATG4CQ96DT6 458 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CLPBQ9H078 707 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.04□□□□□ -1.76
SOX6-217ENST00000533870 TRIT1Q9H3H1 467 aaKnown RBP4.04□□□□□ -1.76
SOX6-217ENST00000533870 ARNT2Q9HBZ2 717 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CD93Q9NPY3 652 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 CASS4Q9NQ75 786 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 KRT84Q9NSB2 600 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 LIMD1Q9UGP4 676 aa4.04□□□□□ -1.76
SOX6-217ENST00000533870 NUDT5Q9UKK9 219 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms