RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 FUCA1P04066 466 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 KRT1P04264 644 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 PNLIPP16233 465 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 ZFXP17010 805 aaPredicted RBP15.39■□□□□ 0.05
CPSF1-211ENST00000533492 CD86P42081 329 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 SLC1A1P43005 524 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 POLD2P49005 469 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 INHBCP55103 352 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 TLE3Q04726 772 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 PPIDQ08752 370 aaKnown RBP15.39■□□□□ 0.05
CPSF1-211ENST00000533492 AP1B1Q10567 949 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 HLTFQ14527 1009 aaKnown RBP eCLIP15.39■□□□□ 0.05
CPSF1-211ENST00000533492 IHHQ14623 411 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 NLRP8Q86W28 1048 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 VSIG1Q86XK7 387 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 RFX6Q8HWS3 928 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 SFTPA2Q8IWL1 248 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 NRSN1Q8IZ57 195 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 ZDHHC1Q8WTX9 485 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 SCAMP4Q969E2 229 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 CCDC97Q96F63 343 aaPredicted RBP15.39■□□□□ 0.05
CPSF1-211ENST00000533492 FCRL3Q96P31 734 aaPredicted RBP15.39■□□□□ 0.05
CPSF1-211ENST00000533492 FOXP3Q9BZS1 431 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 PRORYQ9H606 182 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 SPATS2LQ9NUQ6 558 aaKnown RBP15.39■□□□□ 0.05
CPSF1-211ENST00000533492 INTUQ9ULD6 942 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 SLC17A4Q9Y2C5 497 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 RNF215Q9Y6U7 377 aa15.39■□□□□ 0.05
CPSF1-211ENST00000533492 A0A1W2PNU3 283 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 RHPN2P1A8MT19 583 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 KLK10O43240 276 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 ZW10O43264 779 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 SPOPO43791 374 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 NUDT21O43809 227 aaKnown RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 PRLP01236 227 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 IVLP07476 585 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 AK4P27144 223 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 MLLT3P42568 568 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 STC1P52823 247 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 PDX1P52945 283 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 CXADRP78310 365 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 EIF3IQ13347 325 aaKnown RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 PDK1Q15118 436 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 LRRC38Q5VT99 294 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 SLC30A9Q6PML9 568 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 ADAMTSL4Q6UY14 1074 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 ZNF765Q7L2R6 523 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 RAB11FIP2Q7L804 512 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 GPR155Q7Z3F1 870 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 B3GNT8Q7Z7M8 397 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 RHOT1Q8IXI2 618 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 FBXO39Q8N4B4 442 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 PLD5Q8N7P1 536 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 EXD1Q8NHP7 514 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 CCHCR1Q8TD31 782 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 RNF25Q96BH1 459 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 LIN37Q96GY3 246 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 PRR11Q96HE9 360 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 UBL7Q96S82 380 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 MLPHQ9BV36 600 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 RIOK2Q9BVS4 552 aaKnown RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 ADGRE3Q9BY15 652 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 DPH1Q9BZG8 443 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 CDH19Q9H159 772 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 TAAR2Q9P1P5 351 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 ATXN7L1Q9ULK2 861 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-211ENST00000533492 TMEM98Q9Y2Y6 226 aa15.38■□□□□ 0.05
CPSF1-211ENST00000533492 COL27A1Q8IZC6 1860 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-211ENST00000533492 PTPRQQ9UMZ3 2332 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 C1orf232A0A0U1RR37 186 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 ANKRD66B4E2M5 251 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 PLD2O14939 933 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 PPP1R12AO14974 1030 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-211ENST00000533492 INPP4BO15327 924 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 ASMTLO95671 621 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 FGF1P05230 155 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 ADCY8P40145 1251 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 NOP2P46087 812 aaKnown RBP15.37■□□□□ 0.05
CPSF1-211ENST00000533492 UCNP55089 124 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 DYNLT1P63172 113 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 IFI35P80217 286 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-211ENST00000533492 CTBSQ01459 385 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 SLC9A4Q6AI14 798 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 MARK2Q7KZI7 788 aaKnown RBP15.37■□□□□ 0.05
CPSF1-211ENST00000533492 SPRED1Q7Z699 444 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 TRIM74Q86UV6 250 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 NRROSQ86YC3 692 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 RAVER1Q8IY67 606 aaKnown RBP15.37■□□□□ 0.05
CPSF1-211ENST00000533492 OR2M4Q96R27 311 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 AGAP2Q99490 1192 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 PKD2L2Q9NZM6 624 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 HYOU1Q9Y4L1 999 aa15.37■□□□□ 0.05
CPSF1-211ENST00000533492 PMS2P1A4D2B8 440 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 C3orf70A6NLC5 250 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 CDRT15L2A8MXV6 281 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ECEL1O95672 775 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 SOD1P00441 154 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms