RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 SOD1P00441 154 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 CEACAM5P06731 702 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 GLB1P16278 677 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 CCNCP24863 283 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 SSR1P43307 286 aaKnown RBP11.29□□□□□ -0.6
CLCF1-202ENST00000533438 TAS2R40P59535 323 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 CDK3Q00526 305 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 DPTQ07507 201 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 KIF5AQ12840 1032 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCF1-202ENST00000533438 PDK2Q15119 407 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 CERCAMQ5T4B2 595 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 DENND2CQ68D51 928 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 TIGD7Q6NT04 549 aaPredicted RBP11.29□□□□□ -0.6
CLCF1-202ENST00000533438 Q6ZVL8 140 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 USP45Q70EL2 814 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 B3GNT8Q7Z7M8 397 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 CLEC14AQ86T13 490 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 NRROSQ86YC3 692 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 PQLC3Q8N755 202 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 FAM46DQ8NEK8 389 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 TSGA13Q96PP4 275 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 SEMA3CQ99985 751 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 DPH1Q9BZG8 443 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 LACRTQ9GZZ8 138 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 LRRN3Q9H3W5 708 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 PHPT1Q9NRX4 125 aaPredicted RBP11.29□□□□□ -0.6
CLCF1-202ENST00000533438 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 AMACRQ9UHK6 382 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 A0A0J9YYE9 177 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 A0A0U1RQJ8 604 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 A0A0U1RQS6 177 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 USP27XA6NNY8 438 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 B4DGG1 531 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 KRT86O43790 486 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 NUDT21O43809 227 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 PRLP01236 227 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TRBC1P01850 177 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 RPLP0P05388 317 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ITGA2BP08514 1039 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 CCNB1P14635 433 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF30P17039 623 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 CTPS1P17812 591 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 RBMS1P29558 406 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 CCKBRP32239 447 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 MAN1A1P33908 653 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 GJC1P36383 396 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 UCNP55089 124 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TMPRSS3P57727 454 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 CXADRP78310 365 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 DSC2Q02487 901 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 PTSQ03393 145 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SLC10A2Q12908 348 aaPredicted RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ARHGEF7Q14155 803 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 BROXQ5VW32 411 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 LRRC66Q68CR7 880 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 RAET1GQ6H3X3 334 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SPRED1Q7Z699 444 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 C17orf82Q86X59 251 aaPredicted RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 RHOT2Q8IXI1 618 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ARRDC2Q8TBH0 407 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 HDAC11Q96DB2 347 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SMIM14Q96QK8 99 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TDRD1Q9BXT4 1180 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SYNDIG1Q9H7V2 258 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SPATS2LQ9NUQ6 558 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TRNAU1APQ9NX07 287 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TRMT1Q9NXH9 659 aaKnown RBP11.28□□□□□ -0.6
CLCF1-202ENST00000533438 LRIT1Q9P2V4 623 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 MOSPD1Q9UJG1 213 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SUFUQ9UMX1 484 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TFR2Q9UP52 801 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 SLC17A4Q9Y2C5 497 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 ST14Q9Y5Y6 855 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 RNF215Q9Y6U7 377 aa11.28□□□□□ -0.6
CLCF1-202ENST00000533438 TMX2-CTNND1H3BSU7 103 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 PLD2O14939 933 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 KLK10O43240 276 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 MTA2O94776 668 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 TNFSF15O95150 251 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 FGF1P05230 155 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 HLA-DQB2P05538 268 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 IVLP07476 585 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 KRT7P08729 469 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 CES1P23141 567 aa11.27□□□□□ -0.61
CLCF1-202ENST00000533438 KDELR1P24390 212 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms