RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 AP1S1P61966 158 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 BEX3Q00994 111 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 FADDQ13158 208 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SGCGQ13326 291 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ADAM15Q13444 863 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 KRR1Q13601 381 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 CUL2Q13617 745 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 RIN1Q13671 783 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 USP10Q14694 798 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 ARHGAP19Q14CB8 494 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 HERC3Q15034 1050 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PCBP2Q15366 365 aaKnown RBP eCLIP5.52□□□□□ -1.53
CD44-236ENST00000533222 SLC15A2Q16348 729 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PFKFB3Q16875 520 aaPredicted RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TXNRD1Q16881 649 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 DGKKQ5KSL6 1271 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 C1orf146Q5VVC0 180 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PTRHD1Q6GMV3 140 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 SPOCD1Q6ZMY3 1216 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 C4orf50Q6ZRC1 276 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ZNF767PQ75MW2 155 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TRMT10CQ7L0Y3 403 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TAS2R42Q7RTR8 314 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 BMP8AQ7Z5Y6 402 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 LACC1Q8IV20 430 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 CNGA4Q8IV77 575 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 DENND6AQ8IWF6 608 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SP8Q8IXZ3 490 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 KBTBD2Q8IY47 623 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SH2D3CQ8N5H7 860 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 VGLL2Q8N8G2 317 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 FNDC5Q8NAU1 212 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 NAXEQ8NCW5 288 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TCP10LQ8TDR4 215 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 UTP15Q8TED0 518 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TSPEARQ8WU66 669 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 JADE3Q92613 823 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 DDX17Q92841 729 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 ZUFSPQ96AP4 578 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SLC2A13Q96QE2 648 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TESK2Q96S53 571 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ECSITQ9BQ95 431 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 UBAC1Q9BSL1 405 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 TRIM62Q9BVG3 475 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 GCOM2Q9BZD3 368 aaPredicted RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TM6SF1Q9BZW5 370 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 XYLT2Q9H1B5 865 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 GHITMQ9H3K2 345 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ERVMER34-1Q9H9K5 563 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 UNKLQ9H9P5 680 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 PPANQ9NQ55 473 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TIGARQ9NQ88 270 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PRDM8Q9NQV8 689 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 DNAJC17Q9NVM6 304 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 IFNKQ9P0W0 207 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 NFKBIL1Q9UBC1 381 aaPredicted RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 SAE1Q9UBE0 346 aaPredicted RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 PRSS50Q9UI38 385 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 PSME2Q9UL46 239 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 SPATA2Q9UM82 520 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ERVK-19Q9WJR5 959 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 EIF3LQ9Y262 564 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 RUVBL1Q9Y265 456 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 TDRKHQ9Y2W6 561 aaKnown RBP5.52□□□□□ -1.53
CD44-236ENST00000533222 AUP1Q9Y679 476 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 AP1M2Q9Y6Q5 423 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 ADAMTS20P59510 1910 aa5.52□□□□□ -1.53
CD44-236ENST00000533222 MLH3Q9UHC1 1453 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 PNPLA7Q6ZV29 1317 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 ISPDA4D126 451 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 CCDC160A6NGH7 325 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 CAPN8A6NHC0 703 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 HMX3A6NHT5 357 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 GPR89AB7ZAQ6 455 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 K7EPI3 171 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 CES2O00748 559 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 ITM2AO43736 263 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 PCDHGA12O60330 932 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 EXOC3O60645 756 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 BCAS1O75363 584 aaPredicted RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 MYO1DO94832 1006 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 CCNE2O96020 404 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 APOA4P06727 396 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 CD48P09326 243 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 GPR89BP0CG08 455 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 SAGP10523 405 aaPredicted RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 PRPS2P11908 318 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 ZNF23P17027 643 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 HDCP19113 662 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 MARCKSP29966 332 aaPredicted RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 HOXA7P31268 230 aaPredicted RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 SLC5A2P31639 672 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 CDH5P33151 784 aaPredicted RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 GUCY1A2P33402 732 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 UGT2B10P36537 528 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 NLRP11P59045 1033 aaKnown RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 ASIC1P78348 528 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 FOLH1Q04609 750 aa5.51□□□□□ -1.53
CD44-236ENST00000533222 ILF2Q12905 390 aaKnown RBP5.51□□□□□ -1.53
CD44-236ENST00000533222 DMP1Q13316 513 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms