RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TRIB3Q96RU7 358 aa30.19■■■□□ 2.42
SSSCA1-207ENST00000533115 GLOD4Q9HC38 313 aa30.19■■■□□ 2.42
SSSCA1-207ENST00000533115 IMPACTQ9P2X3 320 aa30.19■■■□□ 2.42
SSSCA1-207ENST00000533115 C1orf232A0A0U1RR37 186 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 PJA2O43164 708 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 PYGLP06737 847 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 GALNT3Q14435 633 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 RTP5Q14D33 572 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 SLC14A2Q15849 920 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 PPP2R5EQ16537 467 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 TMEM139Q8IV31 216 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 SLC17A4Q9Y2C5 497 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 PCDHA3Q9Y5H8 950 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 AK5Q9Y6K8 562 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 ACACAQ13085 2346 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 PKD1L2Q7Z442 2459 aa30.18■■■□□ 2.42
SSSCA1-207ENST00000533115 FUCA1P04066 466 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 KDELC2Q7Z4H8 507 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 ZC3H18Q86VM9 953 aaKnown RBP30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 FAM46DQ8NEK8 389 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 CCL4L1Q8NHW4 92 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 HAUS1Q96CS2 278 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 AGAP2Q99490 1192 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 CCDC3Q9BQI4 270 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 RIOK2Q9BVS4 552 aaKnown RBP30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 SUFUQ9UMX1 484 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 RAXQ9Y2V3 346 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 PCDHB1Q9Y5F3 818 aa30.17■■■□□ 2.42
SSSCA1-207ENST00000533115 RP1P56715 2156 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 MTSS1O43312 755 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 COPS2P61201 443 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 CDK18Q07002 472 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 WASHC5Q12768 1159 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 PCSK7Q16549 785 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 OGFOD3Q6PK18 319 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 BBS12Q6ZW61 710 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 GPR156Q8NFN8 814 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 SPATA22Q8NHS9 363 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 KIAA1524Q8TCG1 905 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 CCHCR1Q8TD31 782 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 HEMGNQ9BXL5 484 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 SUDS3Q9H7L9 328 aaPredicted RBP30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 PKD2L2Q9NZM6 624 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 LAMA5O15230 3695 aa30.16■■■□□ 2.42
SSSCA1-207ENST00000533115 ZFHX4Q86UP3 3567 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 CSO75390 466 aaKnown RBP30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 MT-CYBP00156 380 aaPredicted RBP30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 IVLP07476 585 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 GNPDA1P46926 289 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 POLD2P49005 469 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 SPINT3P49223 89 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 KIAA1328Q86T90 577 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 SPC24Q8NBT2 197 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 OR6C4Q8NGE1 309 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 WDR48Q8TAF3 677 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 GPBAR1Q8TDU6 330 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 PTCD2Q8WV60 388 aaKnown RBP30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 HIC2Q96JB3 615 aa30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 TRNAU1APQ9NX07 287 aaKnown RBP30.15■■■□□ 2.42
SSSCA1-207ENST00000533115 CCDC66A2RUB6 948 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 RGSL1A5PLK6 1076 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 HACD1B0YJ81 288 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 CTNNA2P26232 953 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 CD68P34810 354 aaPredicted RBP30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 DOK6Q6PKX4 331 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 CCDC74AQ96AQ1 378 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 QKIQ96PU8 341 aaKnown RBP eCLIP30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 WDR24Q96S15 920 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 GSDMCQ9BYG8 508 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 DPEP2Q9H4A9 486 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 CFAP47Q6ZTR5 3102 aa30.14■■■□□ 2.42
SSSCA1-207ENST00000533115 APOC4-APOC2K7ER74 178 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 TCEA3O75764 348 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 APOC2P02655 101 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 ILF3Q12906 894 aaKnown RBP eCLIP30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 RBM44Q6ZP01 1051 aaKnown RBP30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 LYSMD3Q7Z3D4 306 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 TRIM74Q86UV6 250 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 NRROSQ86YC3 692 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 LRRC57Q8N9N7 239 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 SCARF2Q96GP6 870 aaPredicted RBP30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 COX14Q96I36 57 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 VAT1Q99536 393 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 FAM83DQ9H4H8 585 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 ZFYVE1Q9HBF4 777 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 MAGEE1Q9HCI5 957 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 EFR3BQ9Y2G0 817 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 TMEM98Q9Y2Y6 226 aa30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 DSPP15924 2871 aaKnown RBP30.13■■■□□ 2.41
SSSCA1-207ENST00000533115 GRID2IPA4D2P6 1211 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 B4DGG1 531 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 NOBOXO60393 691 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 PMPCBO75439 489 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 ISXQ2M1V0 245 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 HENMT1Q5T8I9 393 aaKnown RBP30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 HTR3CQ8WXA8 447 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 EID2BQ96D98 161 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 UBP1Q9NZI7 540 aa30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 KLHL8Q9P2G9 620 aaPredicted RBP30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 RABGEF1Q9UJ41 708 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms