RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 LSM14AQ8ND56 463 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 HELQQ8TDG4 1101 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 SEMA3CQ99985 751 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 DUSP16Q9BY84 665 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 MOV10Q9HCE1 1003 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 PCDH12Q9NPG4 1184 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 VPS45Q9NRW7 570 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 MRPL17Q9NRX2 175 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 TBC1D30Q9Y2I9 924 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 C2orf71A6NGG8 1288 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 KPNA3O00505 521 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 MTA2O94776 668 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 PRG2P13727 222 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 TTPAP49638 278 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 MAZP56270 477 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 JAM2P57087 298 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 PCBP1Q15365 356 aaKnown RBP eCLIP8.12□□□□□ -1.114e-9■■■□□ 19
CTNND1-234ENST00000532844 PAGE2BQ5JRK9 111 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 SDHAF4Q5VUM1 108 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 SCIMPQ6UWF3 145 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 USP50Q70EL3 339 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 CACUL1Q86Y37 369 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 TRAPPC5Q8IUR0 188 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 Q96MT0 163 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 LHX5Q9H2C1 402 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 ERGIC3Q9Y282 383 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 HDAC3O15379 428 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 CCNB2O95067 398 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 RPL38P63173 70 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 GRB14Q14449 540 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 NOMO1Q15155 1222 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 PDCD4Q53EL6 469 aaKnown RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 HECTD3Q5T447 861 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 CXCL17Q6UXB2 119 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 ARL8BQ9NVJ2 186 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 SOHLH2Q9NX45 425 aa8.12□□□□□ -1.11
CTNND1-234ENST00000532844 FBXO9Q9UK97 447 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-234ENST00000532844 SLC28A1O00337 649 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ULK1O75385 1050 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 FAM155BO75949 473 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 RECQL5O94762 991 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 LYPLA2O95372 231 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 SERPINA3P01011 423 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 HGFP14210 728 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ELOAQ14241 798 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 HKDC1Q2TB90 917 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 C9orf57Q5W0N0 161 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 MON1BQ7L1V2 547 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 OR52K2Q8NGK3 314 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ZFP14Q9HCL3 533 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 CLN6Q9NWW5 311 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 CLIC5Q9NZA1 410 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ATXN2Q99700 1313 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 TCRBV7S2A1N4TA0A589 114 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 LOC110117498-PIK3R3F6TDL0 507 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 PIRTP0C851 137 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 UMPSP11172 480 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 POLD2P49005 469 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 PFKPQ01813 784 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 SRSF11Q05519 484 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 HSPA14Q0VDF9 509 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 PTPN20Q4JDL3 420 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 TREML2Q5T2D2 321 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 AADACL4Q5VUY2 407 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 HMBOX1Q6NT76 420 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 GCNT7Q6ZNI0 430 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 GPRIN3Q6ZVF9 776 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 GPR142Q7Z601 462 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 CMC1Q7Z7K0 106 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 BPIFB6Q8NFQ5 453 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 BSNDQ8WZ55 320 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 PTCD3Q96EY7 689 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 P2RY11Q96G91 374 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 REXO5Q96IC2 774 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 PRRG4Q9BZD6 226 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 TRNAU1APQ9NX07 287 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 MRC1P22897 1456 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 MATN2O00339 956 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 BPGMP07738 259 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 CLK3P49761 638 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 LSM3P62310 102 aaKnown RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 IRF8Q02556 426 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 USP4Q13107 963 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 BIKQ13323 160 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 SULT1C3Q6IMI6 304 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ABHD15Q6UXT9 468 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 FAM35AQ86V20 835 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 CDYL2Q8N8U2 506 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 NELL1Q92832 810 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 PPP3R2Q96LZ3 170 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 C2orf49Q9BVC5 232 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ELL3Q9HB65 397 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-234ENST00000532844 SLC27A5Q9Y2P5 690 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 ANKDD1BA6NHY2 528 aa8.11□□□□□ -1.11
CTNND1-234ENST00000532844 WFS1O76024 890 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms