RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 HNRNPH1P31943 449 aaKnown RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 TLE2Q04725 743 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 FSTL1Q12841 308 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 DENND6AQ8IWF6 608 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 CACTIN-AS1Q8N1I8 211 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 OR7D4Q8NG98 312 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 GDPD5Q8WTR4 605 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 MECRQ9BV79 373 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 SPRTNQ9H040 489 aaPredicted RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ACSS3Q9H6R3 686 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 PPIEQ9UNP9 301 aaKnown RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 GSTK1Q9Y2Q3 226 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 HBS1LQ9Y450 684 aaKnown RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 CPQQ9Y646 472 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 LINC00854A0A1B0GVQ3 168 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 CCL22O00626 93 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 HDAC3O15379 428 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 LRATO95237 230 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 SSR2P43308 183 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 CPSF6Q16630 551 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TAC4Q86UU9 113 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 DQX1Q8TE96 717 aaKnown RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 ALG3Q92685 438 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 AZIN1O14977 448 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 PROCP04070 461 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 RPL4P36578 427 aaKnown RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 UBE2R2Q712K3 238 aaPredicted RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 Q96MT0 163 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 EXD2Q9NVH0 621 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 ELOVL2Q9NXB9 296 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 GABRQQ9UN88 632 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 A0A1B0GVM2 712 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TCRBV7S2A1N4TA0A589 114 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TCAF2A6NFQ2 919 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 HOXB6P17509 224 aaKnown RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 FGFR3P22607 806 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 FPGSQ05932 587 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 SEMA5AQ13591 1074 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TEAD4Q15561 434 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TCEAL5Q5H9L2 206 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 PDZK1Q5T2W1 519 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TMC5Q6UXY8 1006 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 RAI2Q9Y5P3 530 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 COLEC10Q9Y6Z7 277 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 H3BM21 787 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TEX28O15482 410 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 NDST3O95803 873 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 ECDO95905 644 aaPredicted RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 HGFP14210 728 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 HNRNPLP14866 589 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 MMP8P22894 467 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 GPD2P43304 727 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 GBE1Q04446 702 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TEX44Q53QW1 395 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 RSBN1Q5VWQ0 802 aaPredicted RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 LIPMQ5VYY2 423 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 FBXO30Q8TB52 745 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 PTCD2Q8WV60 388 aaKnown RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 C12orf42Q96LP6 360 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 R3HDM2Q9Y2K5 976 aaKnown RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 SNED1Q8TER0 1413 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 ARVCFO00192 962 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 GSTM5P46439 218 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 RFTN2Q52LD8 501 aaPredicted RBP14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 SH3PXD2AQ5TCZ1 1133 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 TTC23Q5W5X9 447 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 CAMK1DQ8IU85 385 aa14.76□□□□□ -0.05
PCDHA9-202ENST00000532602 NRP1O14786 923 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 BIRC5O15392 142 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 DDX3YO15523 660 aaKnown RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 RPP40O75818 363 aaKnown RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 TNFAIP8O95379 198 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 C8AP07357 584 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ASPAP45381 313 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 FNBP1LQ5T0N5 605 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 SLC22A17Q8WUG5 538 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 CNPPD1Q9BV87 410 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 SEMA3GQ9NS98 782 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 PACSIN3Q9UKS6 424 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ADSSP30520 456 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ATP12AP54707 1039 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 SLC20A2Q08357 652 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 CMC1Q7Z7K0 106 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 PPCDCQ96CD2 204 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 PTCD3Q96EY7 689 aaKnown RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 PANX1Q96RD7 426 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 C1orf50Q9BV19 199 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 XPR1Q9UBH6 696 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 MYRFQ9Y2G1 1151 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 DYTNA2CJ06 578 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 SPAM1P38567 509 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 CDH4P55283 916 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ECHDC2Q86YB7 292 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 SPATA22Q8NHS9 363 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ZNF671Q8TAW3 534 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 KLK6Q92876 244 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 GPR88Q9GZN0 384 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms