RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 PRSS38A1L453 326 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 H7C0C1 242 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 TJP3O95049 919 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 PYGMP11217 842 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 CD68P34810 354 aaPredicted RBP22.9■■□□□ 1.26
CAPN1-222ENST00000532285 ATP5OP48047 213 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 INSM1Q01101 510 aaPredicted RBP22.9■■□□□ 1.26
CAPN1-222ENST00000532285 PID1Q7Z2X4 250 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 MARCH9Q86YJ5 346 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 ZNF567Q8N184 647 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 CACTIN-AS1Q8N1I8 211 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 IFI44Q8TCB0 444 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 SCAMP4Q969E2 229 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 FERMT1Q9BQL6 677 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 HERPUD2Q9BSE4 406 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 FRMD8Q9BZ67 464 aaPredicted RBP22.9■■□□□ 1.26
CAPN1-222ENST00000532285 MAGEE1Q9HCI5 957 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 PKD2L2Q9NZM6 624 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 KLHL8Q9P2G9 620 aaPredicted RBP22.9■■□□□ 1.26
CAPN1-222ENST00000532285 FAM153AQ9UHL3 310 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 TRHDEQ9UKU6 1024 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 ADGRG1Q9Y653 693 aa22.9■■□□□ 1.26
CAPN1-222ENST00000532285 CPED1A4D0V7 1026 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 EME2A4GXA9 379 aaPredicted RBP22.89■■□□□ 1.25
CAPN1-222ENST00000532285 RGSL1A5PLK6 1076 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 PMPCBO75439 489 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 NDST3O95803 873 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 SOD1P00441 154 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 CEACAM5P06731 702 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 NFKB1P19838 968 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 SPINT3P49223 89 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 OTUD4Q01804 1114 aaKnown RBP22.89■■□□□ 1.25
CAPN1-222ENST00000532285 SLC35F3Q8IY50 421 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 CCDC112Q8NEF3 446 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 ACTL9Q8TC94 416 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 SRPK1Q96SB4 655 aaKnown RBP22.89■■□□□ 1.25
CAPN1-222ENST00000532285 RIOK2Q9BVS4 552 aaKnown RBP22.89■■□□□ 1.25
CAPN1-222ENST00000532285 TSGA10Q9BZW7 698 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 UBP1Q9NZI7 540 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 GPR34Q9UPC5 381 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 ARHGEF17Q96PE2 2063 aaPredicted RBP22.89■■□□□ 1.25
CAPN1-222ENST00000532285 RP1P56715 2156 aa22.89■■□□□ 1.25
CAPN1-222ENST00000532285 ARHGAP6O43182 974 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 OPA1O60313 960 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 FTCDO95954 541 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 CLDN6P56747 220 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 CAMK2BQ13554 666 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 TCEA2Q15560 299 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 GUSBP11Q6P575 273 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 LYSMD3Q7Z3D4 306 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 TAF8Q7Z7C8 310 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 PDCD7Q8N8D1 485 aaKnown RBP22.88■■□□□ 1.25
CAPN1-222ENST00000532285 ZCCHC14Q8WYQ9 949 aaKnown RBP22.88■■□□□ 1.25
CAPN1-222ENST00000532285 NAT6Q93015 286 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 HIC2Q96JB3 615 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 FCRL5Q96RD9 977 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 TMEM168Q9H0V1 697 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 ABCG4Q9H172 646 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 CARS2Q9HA77 564 aaKnown RBP22.88■■□□□ 1.25
CAPN1-222ENST00000532285 ZFYVE1Q9HBF4 777 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 PADI4Q9UM07 663 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 ZFC3H1O60293 1989 aaKnown RBP22.88■■□□□ 1.25
CAPN1-222ENST00000532285 IGF2RP11717 2491 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 USP24Q9UPU5 2620 aa22.88■■□□□ 1.25
CAPN1-222ENST00000532285 KRT86O43790 486 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 RBL1P28749 1068 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 TNNT3P45378 269 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-222ENST00000532285 TARDBPQ13148 414 aaKnown RBP eCLIP22.87■■□□□ 1.25
CAPN1-222ENST00000532285 AADACL2Q6P093 401 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 EFL1Q7Z2Z2 1120 aaKnown RBP22.87■■□□□ 1.25
CAPN1-222ENST00000532285 CDKL3Q8IVW4 592 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-222ENST00000532285 ARL10Q8N8L6 244 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 FAM83DQ9H4H8 585 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 GULP1Q9UBP9 304 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 PACSIN2Q9UNF0 486 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-222ENST00000532285 CLCA2Q9UQC9 943 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 SLC17A4Q9Y2C5 497 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 SCN8AQ9UQD0 1980 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 KMT2BQ9UMN6 2715 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-222ENST00000532285 FREM2Q5SZK8 3169 aa22.87■■□□□ 1.25
CAPN1-222ENST00000532285 TRABD2BA6NFA1 517 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 DDX3YO15523 660 aaKnown RBP22.86■■□□□ 1.25
CAPN1-222ENST00000532285 EPOP01588 193 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 FUCA1P04066 466 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 CAPNS1P04632 268 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 PTMAP06454 111 aaKnown RBP22.86■■□□□ 1.25
CAPN1-222ENST00000532285 IVLP07476 585 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 WNT3AP56704 352 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 EIF3EP60228 445 aaKnown RBP22.86■■□□□ 1.25
CAPN1-222ENST00000532285 HENMT1Q5T8I9 393 aaKnown RBP22.86■■□□□ 1.25
CAPN1-222ENST00000532285 KDELC1Q6UW63 502 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 DCBLD1Q8N8Z6 715 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 MAPK15Q8TD08 544 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 UBE2Q2Q8WVN8 375 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 HES6Q96HZ4 224 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 WDR24Q96S15 920 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 AGAP2Q99490 1192 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 CCDC86Q9H6F5 360 aaKnown RBP22.86■■□□□ 1.25
CAPN1-222ENST00000532285 RAD18Q9NS91 495 aa22.86■■□□□ 1.25
CAPN1-222ENST00000532285 TRNAU1APQ9NX07 287 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms