RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GPR1P46091 355 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 POLD2P49005 469 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 DSC2Q02487 901 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 PEX6Q13608 980 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 NR1D2Q14995 579 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 PDK2Q15119 407 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 MAP9Q49MG5 647 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 SLC30A9Q6PML9 568 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 ADAMTSL4Q6UY14 1074 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 RFLNAQ6ZTI6 216 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 ZNF765Q7L2R6 523 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 TMPRSS9Q7Z410 1059 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 KCTD6Q8NC69 237 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 AP2M1Q96CW1 435 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 SCARF2Q96GP6 870 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-207ENST00000531727 TSGA13Q96PP4 275 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 SMIM14Q96QK8 99 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 CCNL2Q96S94 520 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-207ENST00000531727 CTTNBP2NLQ9P2B4 639 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 UVRAGQ9P2Y5 699 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 CD84Q9UIB8 345 aa16.77■□□□□ 0.28
CPSF1-207ENST00000531727 GCN1Q92616 2671 aaKnown RBP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 ARHGEF17Q96PE2 2063 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CAPN8A6NHC0 703 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 RHPN2P1A8MT19 583 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 B4GAT1O43505 415 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 ECEL1O95672 775 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CPNE6O95741 557 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 ITIH1P19827 911 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 HNRNPH3P31942 346 aaKnown RBP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CASP14P31944 242 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 ADCY8P40145 1251 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 STC1P52823 247 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 EPHB1P54762 984 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 OR1D5P58170 312 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CTBSQ01459 385 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 PTSQ03393 145 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 IHHQ14623 411 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 PHF19Q5T6S3 580 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 DOK6Q6PKX4 331 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 PIM3Q86V86 326 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 NLRP8Q86W28 1048 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 MAP7D3Q8IWC1 876 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CTNNBL1Q8WYA6 563 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 FAF2Q96CS3 445 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CMKLR1Q99788 373 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 TDRD1Q9BXT4 1180 aaKnown RBP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CDH19Q9H159 772 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 SEMA6CQ9H3T2 930 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 RBM22Q9NW64 420 aaKnown RBP eCLIP16.76■□□□□ 0.27
CPSF1-207ENST00000531727 DNPEPQ9ULA0 475 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 CHKBQ9Y259 395 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 TTLL3Q9Y4R7 772 aa16.76■□□□□ 0.27
CPSF1-207ENST00000531727 ZW10O43264 779 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 PYGLP06737 847 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 KRT7P08729 469 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 CA4P22748 312 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 ALDH4A1P30038 563 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 TAS2R40P59535 323 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 CLPPQ16740 277 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-207ENST00000531727 RAVER1Q8IY67 606 aaKnown RBP16.75■□□□□ 0.27
CPSF1-207ENST00000531727 NRSN1Q8IZ57 195 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 NAGSQ8N159 534 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 ARRDC2Q8TBH0 407 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 PATE1Q8WXA2 126 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 SCAMP4Q969E2 229 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 OR2M4Q96R27 311 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 RDH14Q9HBH5 336 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 LCMT1Q9UIC8 334 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 TMEM98Q9Y2Y6 226 aa16.75■□□□□ 0.27
CPSF1-207ENST00000531727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPSF1-207ENST00000531727 UNC13CQ8NB66 2214 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 AGRPO00253 132 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 PRLP01236 227 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 HLA-DQB2P05538 268 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 LIPCP11150 499 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 MX2P20592 715 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 ETV5P41161 510 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 ACTR1BP42025 376 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 GPR3P46089 330 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 ACTR1AP61163 376 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 RPL26P61254 145 aaKnown RBP16.74■□□□□ 0.27
CPSF1-207ENST00000531727 GBE1Q04446 702 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 NIPAL4Q0D2K0 466 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 BIRC2Q13490 618 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 C16orf72Q14CZ0 275 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 TGIF1Q15583 401 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 SLC18A3Q16572 532 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 AMZ1Q400G9 498 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 KIAA1614Q5VZ46 1190 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 TRIM74Q86UV6 250 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 HDAC11Q96DB2 347 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 LYSMD1Q96S90 227 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 AGAP2Q99490 1192 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 NUDT22Q9BRQ3 303 aa16.74■□□□□ 0.27
CPSF1-207ENST00000531727 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms