RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CEP350Q5VT06 3117 aa17.17■□□□□ 0.34
BRCA2-204ENST00000530893 MRASO14807 208 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 VPS4BO75351 444 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 UPP2O95045 317 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 PYGLP06737 847 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 FESP07332 822 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 C8BP07358 591 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 RAD51Q06609 339 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 OR4D1Q15615 310 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 SAMD4BQ5PRF9 694 aaKnown RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 KANK2Q63ZY3 851 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 C8orf82Q6P1X6 216 aaPredicted RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 SPATA24Q86W54 205 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 RYBPQ8N488 228 aaPredicted RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 NKAPQ8N5F7 415 aaKnown RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 RMDN1Q96DB5 314 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 DUS3LQ96G46 650 aaKnown RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 ZNF512Q96ME7 567 aaPredicted RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 SCUBE2Q9NQ36 999 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 CROTQ9UKG9 612 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 A0A1B0GVM2 712 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 ZNF840PA6NDX5 716 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 CAPN8A6NHC0 703 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 E7ENX8 843 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 UBXN8O00124 270 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 NDUFS3O75489 264 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 RHOBTB1O94844 696 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 GFAPP14136 432 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 GATMP50440 423 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 SCNN1BP51168 640 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 LCP2Q13094 533 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 ZNF177Q13360 481 aaPredicted RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 PDK3Q15120 406 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 PFKFB4Q16877 469 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 RAET1EQ8TD07 263 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 DDX50Q9BQ39 737 aaKnown RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 SPON2Q9BUD6 331 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 ADGRE3Q9BY15 652 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 MID1IP1Q9NPA3 183 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 TMEM181Q9P2C4 612 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 HSFX1Q9UBD0 423 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 TMCO1Q9UM00 188 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 TBC1D30Q9Y2I9 924 aa17.16■□□□□ 0.34
BRCA2-204ENST00000530893 MTF2Q9Y483 593 aaPredicted RBP17.16■□□□□ 0.34
BRCA2-204ENST00000530893 UBA6A0AVT1 1052 aaPredicted RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 H3BMM5 538 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 AHCYL1O43865 530 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 SRP72O76094 671 aaKnown RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 RHOCP08134 193 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 PIRTP0C851 137 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 GPX3P22352 226 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 MSX2P35548 267 aaPredicted RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 TTPAP49638 278 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 CHN2P52757 468 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 RHDQ02161 417 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 NOGQ13253 232 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 GPNMBQ14956 572 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 PAOXQ6QHF9 649 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 PCDH20Q8N6Y1 951 aaKnown RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 OR4K2Q8NGD2 314 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 TWIST2Q8WVJ9 160 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 KLHL32Q96NJ5 620 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 CENPKQ9BS16 269 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 C1QTNF3Q9BXJ4 246 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 AKTIPQ9H8T0 292 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 COPS7BQ9H9Q2 264 aaPredicted RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 CD300AQ9UGN4 299 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 AGO1Q9UL18 857 aaKnown RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 SPO11Q9Y5K1 396 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 BACE2Q9Y5Z0 518 aa17.15■□□□□ 0.34
BRCA2-204ENST00000530893 OAS3Q9Y6K5 1087 aaKnown RBP17.15■□□□□ 0.34
BRCA2-204ENST00000530893 H0YJX3 145 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 STX16O14662 325 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 LPOP22079 712 aaPredicted RBP17.14■□□□□ 0.34
BRCA2-204ENST00000530893 CDH13P55290 713 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 RPS24P62847 133 aaKnown RBP17.14■□□□□ 0.34
BRCA2-204ENST00000530893 GEN1Q17RS7 908 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 TXNDC11Q6PKC3 985 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 ZNF783Q6ZMS7 281 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 DENND1CQ8IV53 801 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.34
BRCA2-204ENST00000530893 FBXO39Q8N4B4 442 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 EXT2Q93063 718 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 PRICKLE1Q96MT3 831 aaPredicted RBP17.14■□□□□ 0.34
BRCA2-204ENST00000530893 GCNAQ96QF7 691 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 HOPXQ9BPY8 73 aaPredicted RBP17.14■□□□□ 0.34
BRCA2-204ENST00000530893 RNF112Q9ULX5 631 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 COMMD10Q9Y6G5 202 aa17.14■□□□□ 0.34
BRCA2-204ENST00000530893 ATP6AP2A0A1C7CYW4 349 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 NT5C1B-RDH14C9J2C7 533 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 PITPNM1O00562 1244 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 COCHO43405 550 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
BRCA2-204ENST00000530893 ATP6AP2O75787 350 aa17.14■□□□□ 0.33
BRCA2-204ENST00000530893 MATN4O95460 622 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms