RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 RBM22Q9NW64 420 aaKnown RBP eCLIP20.84■□□□□ 0.93
SMPD1-204ENST00000530395 WDR70Q9NW82 654 aa20.84■□□□□ 0.93
SMPD1-204ENST00000530395 CD84Q9UIB8 345 aa20.84■□□□□ 0.93
SMPD1-204ENST00000530395 ZFC3H1O60293 1989 aaKnown RBP20.84■□□□□ 0.93
SMPD1-204ENST00000530395 AHCTF1Q8WYP5 2266 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 A0A0J9YYE9 177 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 K7ENP7 123 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 TRBC1P01850 177 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 H2AFZP0C0S5 128 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 MX2P20592 715 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 CCNCP24863 283 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 MAZP56270 477 aaKnown RBP20.83■□□□□ 0.93
SMPD1-204ENST00000530395 CFHR1Q03591 330 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ZFP36L1Q07352 338 aaKnown RBP20.83■□□□□ 0.93
SMPD1-204ENST00000530395 PTPRRQ15256 657 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ZFYVE27Q5T4F4 411 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 PHF19Q5T6S3 580 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ALG1LQ6GMV1 187 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 INO80CQ6PI98 192 aaPredicted RBP20.83■□□□□ 0.93
SMPD1-204ENST00000530395 SLC30A9Q6PML9 568 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ADAMTSL4Q6UY14 1074 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 H2AFVQ71UI9 128 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ZNF765Q7L2R6 523 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 NRROSQ86YC3 692 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMPD1-204ENST00000530395 TSGA13Q96PP4 275 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 CMKLR1Q99788 373 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 TDRD1Q9BXT4 1180 aaKnown RBP20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ABCG8Q9H221 673 aa20.83■□□□□ 0.93
SMPD1-204ENST00000530395 AKAP7Q9P0M2 348 aaPredicted RBP20.83■□□□□ 0.93
SMPD1-204ENST00000530395 ZNF462Q96JM2 2506 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 MAP3K6O95382 1288 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 CPNE6O95741 557 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 FGF1P05230 155 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 AK4P27144 223 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-204ENST00000530395 ADCY8P40145 1251 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 POLD2P49005 469 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 B4GALNT1Q00973 533 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 CTBSQ01459 385 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 DSC2Q02487 901 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 CLPPQ16740 277 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-204ENST00000530395 ATP13A4Q4VNC1 1196 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 PCSK4Q6UW60 755 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 ZNF438Q7Z4V0 828 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 PIM3Q86V86 326 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 C17orf82Q86X59 251 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-204ENST00000530395 ZNF830Q96NB3 372 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-204ENST00000530395 CCNL2Q96S94 520 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-204ENST00000530395 ACSL6Q9UKU0 697 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 NENFQ9UMX5 172 aa20.82■□□□□ 0.92
SMPD1-204ENST00000530395 PIEZO2Q9H5I5 2752 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 NVLO15381 856 aaKnown RBP20.81■□□□□ 0.92
SMPD1-204ENST00000530395 ECEL1O95672 775 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 FUCA1P04066 466 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 PTMSP20962 102 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 ALDH4A1P30038 563 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 HNRNPH3P31942 346 aaKnown RBP20.81■□□□□ 0.92
SMPD1-204ENST00000530395 RPL26P61254 145 aaKnown RBP20.81■□□□□ 0.92
SMPD1-204ENST00000530395 PTSQ03393 145 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 NR1D2Q14995 579 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 SLC18A3Q16572 532 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 AMZ1Q400G9 498 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 NLRP8Q86W28 1048 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 SLITRK4Q8IW52 837 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 RAVER1Q8IY67 606 aaKnown RBP20.81■□□□□ 0.92
SMPD1-204ENST00000530395 NRSN1Q8IZ57 195 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 ZNF843Q8N446 348 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 PTCD2Q8WV60 388 aaKnown RBP20.81■□□□□ 0.92
SMPD1-204ENST00000530395 FAF2Q96CS3 445 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 OR2M4Q96R27 311 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 DEF6Q9H4E7 631 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 RPL26L1Q9UNX3 145 aaKnown RBP20.81■□□□□ 0.92
SMPD1-204ENST00000530395 CHKBQ9Y259 395 aa20.81■□□□□ 0.92
SMPD1-204ENST00000530395 SOD1P00441 154 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 MAN1A1P33908 653 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 ACTR1BP42025 376 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 GPR3P46089 330 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 STC1P52823 247 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 OR1D5P58170 312 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 TAS2R40P59535 323 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 ACTR1AP61163 376 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 RFLNAQ6ZTI6 216 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 CPNE8Q86YQ8 564 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 CCNYQ8ND76 341 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 SCAMP4Q969E2 229 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 HDAC11Q96DB2 347 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 SCARF2Q96GP6 870 aaPredicted RBP20.8■□□□□ 0.92
SMPD1-204ENST00000530395 XPO4Q9C0E2 1151 aaKnown RBP20.8■□□□□ 0.92
SMPD1-204ENST00000530395 PCDH9Q9HC56 1237 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 COL6A6A6NMZ7 2263 aa20.8■□□□□ 0.92
SMPD1-204ENST00000530395 A0A0U1RQS6 177 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 AGRPO00253 132 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 B4GAT1O43505 415 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 HLA-DQB2P05538 268 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 LIPCP11150 499 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 ITIH1P19827 911 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 MAPK10P53779 464 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 GBE1Q04446 702 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 LRP8Q14114 963 aa20.79■□□□□ 0.92
SMPD1-204ENST00000530395 TRIM14Q14142 442 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms