RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PRPSAP1	Q14558	356 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	PID1	Q7Z2X4	250 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	ADIPOR2	Q86V24	386 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	C12orf40	Q86WS4	652 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	NETO2	Q8NC67	525 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	PPP1R14C	Q8TAE6	165 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	ISG20	Q96AZ6	181 aa	Known RBP	14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	PSKH2	Q96QS6	385 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	POLR1E	Q9GZS1	481 aa	Known RBP	14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	PRDM6	Q9NQX0	595 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	RBM22	Q9NW64	420 aa	Known RBP eCLIP	14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	INTS6	Q9UL03	887 aa	Known RBP	14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	EMCN	Q9ULC0	261 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	APOBEC2	Q9Y235	224 aa	Known RBP	14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	PIAS3	Q9Y6X2	628 aa		14.6	□□□□□ -0.07
NR1H3-231	ENST00000529540	SMIM31	A0A1B0GVY4	71 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	TBC1D3B	A6NDS4	549 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	C19orf67	A6NJJ6	358 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	ERI2	A8K979	691 aa	Known RBP	14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	MAN2B1	O00754	1011 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	PLIN3	O60664	434 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	KAT7	O95251	611 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	PEX11B	O96011	259 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	JCHAIN	P01591	159 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	ASGR2	P07307	311 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	APRT	P07741	180 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	MLN	P12872	115 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	DRD1	P21728	446 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	GRK2	P25098	689 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	TNFRSF4	P43489	277 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	MAPK8	P45983	427 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	SLC1A6	P48664	564 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	SLC25A3	Q00325	362 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	NSUN2	Q08J23	767 aa	Known RBP eCLIP	14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	NIPAL4	Q0D2K0	466 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	MED21	Q13503	144 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	SEMA5A	Q13591	1074 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	INSC	Q1MX18	579 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	SFT2D3	Q587I9	215 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	FAXC	Q5TGI0	409 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	ASTL	Q6HA08	431 aa	Predicted RBP	14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	TRMT10B	Q6PF06	316 aa	Known RBP	14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	RNF111	Q6ZNA4	994 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	ZNF567	Q8N184	647 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	ASB2	Q96Q27	587 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	CIPC	Q9C0C6	399 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	GBA3	Q9H227	469 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	ELOVL2	Q9NXB9	296 aa		14.59	□□□□□ -0.07
NR1H3-231	ENST00000529540	PSMD3	O43242	534 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	SNAP91	O60641	907 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	SIN3B	O75182	1162 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	SLC10A7	Q0GE19	358 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	GRSF1	Q12849	480 aa	Known RBP eCLIP	14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	SLC14A2	Q15849	920 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	GEN1	Q17RS7	908 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	SYCP2L	Q5T4T6	812 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	MROH9	Q5TGP6	573 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	ALG1L	Q6GMV1	187 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	ZCCHC23	Q6ZST2	131 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	ARHGAP22	Q7Z5H3	698 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	UBALD2	Q8IYN6	164 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	PHTF2	Q8N3S3	785 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	SLC25A41	Q8N5S1	370 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	PCDH20	Q8N6Y1	951 aa	Known RBP	14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	CMTM5	Q96DZ9	223 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	MGME1	Q9BQP7	344 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	DCDC2	Q9UHG0	476 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	ERVW-1	Q9UQF0	538 aa		14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	AAR2	Q9Y312	384 aa	Known RBP	14.58	□□□□□ -0.07
NR1H3-231	ENST00000529540	KIAA1549L	Q6ZVL6	1849 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	NYNRIN	Q9P2P1	1898 aa	Known RBP	14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	COL4A3	Q01955	1670 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ITM2A	O43736	263 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ATP9B	O43861	1147 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ANXA9	O76027	345 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	TMCC1	O94876	653 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	GLDC	P23378	1020 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	SLC6A11	P48066	632 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	IDH3A	P50213	366 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	PRKCQ	Q04759	706 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ZBTB17	Q13105	803 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ITGA9	Q13797	1035 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	GRM3	Q14832	879 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	PCLAF	Q15004	111 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	FBXO43	Q4G163	708 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ANKRD20A4	Q4UJ75	823 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	MAVS	Q7Z434	540 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	PLPP6	Q8IY26	295 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	DRAXIN	Q8NBI3	349 aa	Predicted RBP	14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	PPP4R1	Q8TF05	950 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	NAT14	Q8WUY8	206 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	SHD	Q96IW2	340 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	AGAP3	Q96P47	875 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	FCRL5	Q96RD9	977 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	HEBP1	Q9NRV9	189 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	VPS45	Q9NRW7	570 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	ADAMTS6	Q9UKP5	1117 aa		14.58	□□□□□ -0.08
NR1H3-231	ENST00000529540	NUP205	Q92621	2012 aa		14.57	□□□□□ -0.08
NR1H3-231	ENST00000529540	ZNF195	O14628	629 aa		14.57	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms