RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FATE1Q969F0 183 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 HDAC11Q96DB2 347 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM122AQ96E09 287 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CFAP36Q96G28 342 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 HES6Q96HZ4 224 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 RBM41Q96IZ5 413 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 PSKH2Q96QS6 385 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 OMDQ99983 421 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 GPR174Q9BXC1 333 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CPEB1Q9BZB8 566 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 TM6SF2Q9BZW4 377 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 BTBD1Q9H0C5 482 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 KCNF1Q9H3M0 494 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 SP110Q9HB58 689 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ZFYVE1Q9HBF4 777 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 SGK2Q9HBY8 427 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LZTFL1Q9NQ48 299 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LATS2Q9NRM7 1088 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF446Q9NWS9 450 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ZFATQ9P243 1243 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 LHX3Q9UBR4 397 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 SERGEFQ9UGK8 458 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 ITGB1BP2Q9UKP3 347 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 RAB23Q9ULC3 237 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 FZD4Q9ULV1 537 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 SMG5Q9UPR3 1016 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 HEY1Q9Y5J3 304 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 KCNMB2Q9Y691 235 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 CAPN6Q9Y6Q1 641 aa6.32□□□□□ -1.4
ATPAF1-209ENST00000529214 FANCMQ8IYD8 2048 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 hCG_1818297A0A087WSY0 165 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR23AA6NEV1 266 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 METTL12A8MUP2 240 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 C10orf142B7Z368 130 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 KIF2AO00139 706 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 KPNA3O00505 521 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 KRIT1O00522 736 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 ENC1O14682 589 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 DDX3YO15523 660 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 DIAPH2O60879 1101 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 NDUFS2O75306 463 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 SKAP2O75563 359 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 FTCDO95954 541 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 IGSF6O95976 241 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PAHP00439 452 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 RETP07949 1114 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 TYRP1P17643 537 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CR2P20023 1033 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 TGM2P21980 687 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GKP32189 559 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PTPN7P35236 360 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PLA2G5P39877 138 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PTGER3P43115 390 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CCT8P50990 548 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 RENBPP51606 427 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR20EP86478 221 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR20CP86479 221 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR20DP86480 221 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR20BP86481 221 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR20AP86496 221 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 RAD51Q06609 339 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF33AQ06730 810 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PPIDQ08752 370 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CNTN1Q12860 1018 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 BNIP1Q12981 228 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GPS2Q13227 327 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GBX1Q14549 363 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GRM3Q14832 879 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PDK1Q15118 436 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 LLGL1Q15334 1064 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 INAQ16352 499 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 FOXB2Q5VYV0 432 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 TIGD7Q6NT04 549 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 NPNTQ6UXI9 565 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GDPD4Q6W3E5 623 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM124AQ86V42 546 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC41A1Q8IVJ1 513 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CCDC50Q8IVM0 306 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 REXO1L1PQ8IX06 675 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 PGBD5Q8N414 524 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 RYBPQ8N488 228 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 ATPAF2Q8N5M1 289 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 DEFB119Q8N690 84 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 UBL4BQ8N7F7 174 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 CCNYQ8ND76 341 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 OR6K2Q8NGY2 324 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 HCAR2Q8TDS4 363 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GANCQ8TET4 914 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 COG1Q8WTW3 980 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 NSMCE1Q8WV22 266 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 DNASE2BQ8WZ79 361 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 RUBCNQ92622 972 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC35B4Q969S0 331 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 ARRDC3Q96B67 414 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 GDAP1L1Q96MZ0 367 aa6.31□□□□□ -1.4
ATPAF1-209ENST00000529214 OLFM3Q96PB7 478 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms