RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
C11orf54-207ENST00000528288 COMMD3-BMI1R4GMX3 469 aa7.44□□□□□ -1.22
C11orf54-207ENST00000528288 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 DUSP11O75319 330 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ITGB6P18564 788 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 HERVK_113P63132 956 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CTXN3Q4LDR2 81 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CLLU1OSQ5K130 101 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 NADSYN1Q6IA69 706 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RSPO2Q6UXX9 243 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 LINGO4Q6UY18 593 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 C16orf59Q7L2K0 433 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CHST15Q7LFX5 561 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 MRPL10Q7Z7H8 261 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 KLHDC8BQ8IXV7 354 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 TSPAN14Q8NG11 270 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 TSPAN17Q96FV3 270 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SLC25A23Q9BV35 468 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ERVK-6Q9BXR3 956 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 PRDM5Q9NQX1 630 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CD300AQ9UGN4 299 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 BCAP29Q9UHQ4 241 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 VPS28Q9UK41 221 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 TLR6Q9Y2C9 796 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 PRRC2BQ5JSZ5 2229 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 MROH6A6NGR9 719 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 AZIN1O14977 448 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ANGPT2O15123 496 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 INPP4BO15327 924 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 NIPSNAP2O75323 286 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 HSPA1AP0DMV8 641 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 HSPA1BP0DMV9 641 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 IRF1P10914 325 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RHOQP17081 205 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 DNAJB2P25686 324 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 YAP1P46937 504 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 NDST2P52849 883 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RFTN1Q14699 578 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 VARS2Q5ST30 1063 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 MON1AQ86VX9 555 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RALGPS2Q86X27 583 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SLC15A3Q8IY34 581 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ZNF683Q8IZ20 524 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CLYBLQ8N0X4 340 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 UMODL1-AS1Q8N2C9 162 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ZNF786Q8N393 782 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SIDT2Q8NBJ9 832 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 PTCD2Q8WV60 388 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CYGBQ8WWM9 190 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 DLG3Q92796 817 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SLC39A13Q96H72 371 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 GPR21Q99679 349 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 MFSD1Q9H3U5 465 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CMTM6Q9NX76 183 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 POLG2Q9UHN1 485 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 BTN3A1O00481 513 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SLC7A4O43246 635 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 HTRA2O43464 458 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 FAM163BP0C2L3 166 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ZNF37AP17032 561 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RPL17P18621 184 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CALRP27797 417 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SLC5A2P31639 672 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 PIK3CGP48736 1102 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ZNF135P52742 658 aaPredicted RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 UFM1P61960 85 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CAP1Q01518 475 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SEMG2Q02383 582 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 DUSP4Q13115 394 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CRHR2Q13324 411 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 KIAA0408Q6ZU52 694 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 OR4L1Q8NH43 312 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 NCSTNQ92542 709 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 FBXL20Q96IG2 436 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 GPR62Q9BZJ7 368 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 MRM3Q9HC36 420 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 ATP13A1Q9HD20 1204 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 CATSPERZQ9NTU4 200 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 TMEM181Q9P2C4 612 aa7.43□□□□□ -1.22
C11orf54-207ENST00000528288 SUCOQ9UBS9 1254 aaKnown RBP7.43□□□□□ -1.22
C11orf54-207ENST00000528288 RNF103-CHMP3A0A140T963 221 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 A8MX80 341 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 KATNA1O75449 491 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 ECI2O75521 394 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 ADSLP30566 484 aaPredicted RBP7.42□□□□□ -1.22
C11orf54-207ENST00000528288 GGT5P36269 586 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 HK2P52789 917 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 ZNF33AQ06730 810 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 MAPRE1Q15691 268 aaKnown RBP7.42□□□□□ -1.22
C11orf54-207ENST00000528288 RBBP7Q16576 425 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 PAGE3Q5JUK9 113 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 ZNF598Q86UK7 904 aaKnown RBP7.42□□□□□ -1.22
C11orf54-207ENST00000528288 SLC22A9Q8IVM8 553 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 CHERPQ8IWX8 916 aaKnown RBP7.42□□□□□ -1.22
C11orf54-207ENST00000528288 PIANPQ8IYJ0 282 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 LPCAT1Q8NF37 534 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 CCDC126Q96EE4 140 aa7.42□□□□□ -1.22
C11orf54-207ENST00000528288 MRPS26Q9BYN8 205 aaKnown RBP7.42□□□□□ -1.22
C11orf54-207ENST00000528288 MUC3BQ9H195 1237 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms