RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TPM3P06753 285 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 FGF3P11487 239 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 ITIH2P19823 946 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 AMPD1P23109 780 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 HSPA9P38646 679 aaKnown RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 RGRP47804 291 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 AP1S1P61966 158 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 MC1RQ01726 317 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 SLC25A11Q02978 314 aaKnown RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 BCL2L1Q07817 233 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 HLTFQ14527 1009 aaKnown RBP eCLIP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 LBRQ14739 615 aaKnown RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 WSCD2Q2TBF2 565 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 AMZ1Q400G9 498 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 RALGPS1Q5JS13 557 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 LRRC73Q5JTD7 316 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 CCDC122Q5T0U0 273 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 CFAP58Q5T655 872 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 FHL5Q5TD97 284 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 TMCO3Q6UWJ1 677 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 TMPRSS9Q7Z410 1059 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 CAMK1DQ8IU85 385 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 TEX19Q8NA77 164 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 AGBL5Q8NDL9 886 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 KIAA1524Q8TCG1 905 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 CSPG4P5Q96PW8 444 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 WRAP53Q9BUR4 548 aaKnown RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 DDA1Q9BW61 102 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 CINPQ9BW66 212 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 DPEP2Q9H4A9 486 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 GPN2Q9H9Y4 310 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 RDH14Q9HBH5 336 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 IFNKQ9P0W0 207 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 ANAPC7Q9UJX3 599 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 VPS4AQ9UN37 437 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 ATP8A1Q9Y2Q0 1164 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 DGKBQ9Y6T7 804 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 POLQO75417 2590 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 RHPN2P1A8MT19 583 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 B4DGG1 531 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
CPSF1-203ENST00000527916 RAD1O60671 282 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 MAFKO60675 156 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 SOCS5O75159 536 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 PEX11BO96011 259 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 PRKAR1AP10644 381 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 TCF4P15884 667 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 KELP23276 732 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 IL4RP24394 825 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 ALDH4A1P30038 563 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 CASP14P31944 242 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 CSTF2P33240 577 aaKnown RBP eCLIP10.52□□□□□ -0.73
CPSF1-203ENST00000527916 SERPINB6P35237 376 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 MMP12P39900 470 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 LIG3P49916 1009 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 SCNN1BP51168 640 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 RAB15P59190 212 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 B4GALNT1Q00973 533 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 SLC10A7Q0GE19 358 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 BIRC2Q13490 618 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 TRA2AQ13595 282 aaKnown RBP eCLIP10.52□□□□□ -0.73
CPSF1-203ENST00000527916 INPP5AQ14642 412 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
CPSF1-203ENST00000527916 SMTNL2Q2TAL5 461 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 DCAF12Q5T6F0 453 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 TXNRD3NBQ6F5E7 133 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 ARHGAP36Q6ZRI8 547 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 ZSWIM9Q86XI8 627 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 BBS5Q8N3I7 341 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 RCBTB1Q8NDN9 531 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 HSPH1Q92598 858 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 NUP85Q9BW27 656 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 PCDH18Q9HCL0 1135 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.52□□□□□ -0.73
CPSF1-203ENST00000527916 KCTD5Q9NXV2 234 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 UVRAGQ9P2Y5 699 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 OR1A2Q9Y585 309 aa10.52□□□□□ -0.73
CPSF1-203ENST00000527916 LRP4O75096 1905 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 IGHV5-10-1A0A0J9YXX1 117 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 SSU72P8A0A1W2PR75 194 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 EFCAB7A8K855 629 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 NKX2-8O15522 239 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 CBFA2T2O43439 604 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 KRT7P08729 469 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 HOXC4P09017 264 aaPredicted RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 MAP4P27816 1152 aaKnown RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 TRIM23P36406 574 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 ARSEP51690 589 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 MLLT10P55197 1068 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 CDH6P55285 790 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 OR1D5P58170 312 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 CDC20Q12834 499 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 RALGDSQ12967 914 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 MTM1Q13496 603 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 TRIM14Q14142 442 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 SLC18A3Q16572 532 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms