RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	PLEKHG4B	Q96PX9	1271 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	TRIB3	Q96RU7	358 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	LYSMD1	Q96S90	227 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	CYP2S1	Q96SQ9	504 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	HEPH	Q9BQS7	1158 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	WDR83	Q9BRX9	315 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	TRIM56	Q9BRZ2	755 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	SLC46A2	Q9BY10	475 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	LRRC3	Q9BY71	257 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	MMADHC	Q9H3L0	296 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	RABEP2	Q9H5N1	569 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	NSUN3	Q9H649	340 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	FBRS	Q9HAH7	460 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZFP14	Q9HCL3	533 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	MRPL40	Q9NQ50	206 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	DEC1	Q9P2X7	70 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	HECA	Q9UBI9	543 aa	Predicted RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZFP69B	Q9UJL9	534 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	RUVBL2	Q9Y230	463 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	CHKB	Q9Y259	395 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	SLC27A6	Q9Y2P4	619 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	RRP15	Q9Y3B9	282 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	PCDHB9	Q9Y5E1	797 aa		6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718	TNPO3	Q9Y5L0	923 aa	Known RBP	6.26	□□□□□ -1.41
PABPC4-222	ENST00000527718		A0A0G2JND7	137 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	C1orf232	A0A0U1RR37	186 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	UBA6	A0AVT1	1052 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	WDR91	A4D1P6	747 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	KLHL33	A6NCF5	533 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	CAPN8	A6NHC0	703 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	HIDE1	A8MVS5	230 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	WASH3P	C4AMC7	463 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	PSMD11	O00231	422 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	GFRA2	O00451	464 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	PRMT5	O14744	637 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	HGS	O14964	777 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	HTRA2	O43464	458 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	LDB2	O43679	373 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	DNAJC6	O75061	913 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	VPS4B	O75351	444 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	CRCP	O75575	148 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZMPSTE24	O75844	475 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	HAUS5	O94927	633 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	MLYCD	O95822	493 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	GOT2	P00505	430 aa	Known RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	AHSG	P02765	367 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	PROC	P04070	461 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	MMP2	P08253	660 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	DLD	P09622	509 aa	Known RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	OR56A5	P0C7T3	313 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ENO3	P13929	434 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	VCL	P18206	1134 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	SAT1	P21673	171 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	RPS3	P23396	243 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	DGKA	P23743	735 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	BMP8B	P34820	402 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	NSG1	P42857	185 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	MAGEA9	P43362	315 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZNF140	P52738	457 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	CORO7	P57737	925 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	IL2	P60568	153 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ABCE1	P61221	599 aa	Known RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ARF5	P84085	180 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	LMAN2	Q12907	356 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	GALNT3	Q14435	633 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	MAPRE2	Q15555	327 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZNF77	Q15935	545 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZNF284	Q2VY69	593 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	C4orf48	Q5BLP8	95 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZRANB3	Q5FWF4	1079 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	HECTD2	Q5U5R9	776 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	SEL1L3	Q68CR1	1132 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	MBLAC2	Q68D91	279 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	PTRHD1	Q6GMV3	140 aa	Known RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	SDE2	Q6IQ49	451 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	C22orf39	Q6P5X5	142 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	CES3	Q6UWW8	571 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	GDPD4	Q6W3E5	623 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	SH2D5	Q6ZV89	423 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	FRA10AC1	Q70Z53	315 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	TAS2R42	Q7RTR8	314 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	TRMT11	Q7Z4G4	463 aa	Known RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	GRASP	Q7Z6J2	395 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ADAMTSL2	Q86TH1	951 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	EGFL6	Q8IUX8	553 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ARID3B	Q8IVW6	561 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	TCAIM	Q8N3R3	496 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	PHC3	Q8NDX5	983 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	LRRN4	Q8WUT4	740 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	OR8D1	Q8WZ84	308 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	INPP5D	Q92835	1189 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	RAB7B	Q96AH8	199 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	PBXIP1	Q96AQ6	731 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	ZBTB9	Q96C00	473 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	VWCE	Q96DN2	955 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	SCRN2	Q96FV2	425 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	MSANTD3	Q96H12	275 aa		6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	FCRL3	Q96P31	734 aa	Predicted RBP	6.25	□□□□□ -1.41
PABPC4-222	ENST00000527718	AGAP2	Q99490	1192 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms