RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PTCD2Q8WV60 388 aaKnown RBP22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 MCCC1Q96RQ3 725 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 POLR1EQ9GZS1 481 aaKnown RBP22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 ABCG8Q9H221 673 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 HAUS2Q9NVX0 235 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 RCOR3Q9P2K3 495 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 ACSL6Q9UKU0 697 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 PPIL1Q9Y3C6 166 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 COL6A6A6NMZ7 2263 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 A0A087X0T9 212 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 J3QKU1 62 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 CYP1A2P05177 515 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 IVLP07476 585 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 CD48P09326 243 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 FAM228BP0C875 321 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 IL4RP24394 825 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 TEAD1P28347 426 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 ACTR1BP42025 376 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 ACTR1AP61163 376 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 DPTQ07507 201 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZFYVE27Q5T4F4 411 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 TIGD7Q6NT04 549 aaPredicted RBP22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 ALKBH5Q6P6C2 394 aaKnown RBP22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 MARK2Q7KZI7 788 aaKnown RBP22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 C17orf82Q86X59 251 aaPredicted RBP22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 TEX26Q8N6G2 289 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 PATE1Q8WXA2 126 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 SCAMP4Q969E2 229 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 SGF29Q96ES7 293 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 ARHGAP9Q9BRR9 750 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 CDH19Q9H159 772 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 RBM22Q9NW64 420 aaKnown RBP eCLIP22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 SLC17A4Q9Y2C5 497 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 LUC7L2Q9Y383 392 aaKnown RBP22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 PLEKHM1Q9Y4G2 1056 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 SCN8AQ9UQD0 1980 aa22.3■■□□□ 1.16
TRAPPC4-208ENST00000527680 B8ZZF3 427 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 MAP3K6O95382 1288 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 ASMTLO95671 621 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 CES1P23141 567 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 GARSP41250 739 aaKnown RBP22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZBED6P86452 979 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 PTSQ03393 145 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 SRSF6Q13247 344 aaKnown RBP22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 C16orf72Q14CZ0 275 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 ATP13A4Q4VNC1 1196 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 LUZP1Q86V48 1076 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZSCAN1Q8NBB4 408 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 RCBTB1Q8NDN9 531 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 SMIM14Q96QK8 99 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 NUDT22Q9BRQ3 303 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZMYND15Q9H091 742 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 CBX8Q9HC52 389 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 CHKBQ9Y259 395 aa22.29■■□□□ 1.16
TRAPPC4-208ENST00000527680 TRBV23OR9-2A0A075B6M9 112 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 MATN3O15232 486 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 MFSD11O43934 449 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZNF30P17039 623 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 CD1CP29017 333 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 GPR3P46089 330 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 DSC2Q02487 901 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 IFI16Q16666 785 aaKnown RBP22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 NKAIN2Q5VXU1 208 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 MAP7D3Q8IWC1 876 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 NAGSQ8N159 534 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 OR2M4Q96R27 311 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 FOXJ2Q9P0K8 574 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 CAPN11Q9UMQ6 739 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 ST14Q9Y5Y6 855 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZNF462Q96JM2 2506 aa22.28■■□□□ 1.16
TRAPPC4-208ENST00000527680 A0A0J9YYE9 177 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 C9orf172C9J069 976 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 PPM1DO15297 605 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 INPP4BO15327 924 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 FZD6O60353 706 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 TRBC1P01850 177 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 PYGLP06737 847 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 CCL4P13236 92 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 CA4P22748 312 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 CCNCP24863 283 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 GALNT2Q10471 571 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 DPYSL3Q14195 570 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 CLPPQ16740 277 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 ANKRD20A8PQ5CZ79 823 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 ADAMTSL4Q6UY14 1074 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZNF574Q6ZN55 896 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZNF438Q7Z4V0 828 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 TRIM74Q86UV6 250 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 VASH2Q86V25 355 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 EXD1Q8NHP7 514 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZNF564Q8TBZ8 553 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 KCNK4Q9NYG8 393 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 CTTNBP2NLQ9P2B4 639 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZNHIT2Q9UHR6 403 aa22.27■■□□□ 1.16
TRAPPC4-208ENST00000527680 IGHV5-10-1A0A0J9YXX1 117 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 SYCE3A1L190 88 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 GOLGA6L19H0YKK7 550 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 PAFAH1B3Q15102 231 aaKnown RBP22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 PDK2Q15119 407 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 NCBP2-AS2Q69YL0 99 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms