RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 RGSL1A5PLK6 1076 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 SOD1P00441 154 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 CEACAM5P06731 702 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 CD68P34810 354 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 CLDN6P56747 220 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 NOMO1Q15155 1222 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 PCSK7Q16549 785 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 CCDC70Q6NSX1 233 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 SLC35F3Q8IY50 421 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 PDCD7Q8N8D1 485 aaKnown RBP26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 HERPUD2Q9BSE4 406 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 FRMD8Q9BZ67 464 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 KLHL8Q9P2G9 620 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 FAM153AQ9UHL3 310 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 TRHDEQ9UKU6 1024 aa26.27■■□□□ 1.8
TSPAN4-217ENST00000527644 A0A0U1RQJ8 604 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 CPED1A4D0V7 1026 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 MIF4GDA9UHW6 222 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 H7C0C1 242 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 OPA1O60313 960 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 TJP3O95049 919 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 PYGMP11217 842 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 ATP5OP48047 213 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 SPINT3P49223 89 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 TARDBPQ13148 414 aaKnown RBP eCLIP26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 TCEA2Q15560 299 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 GUSBP11Q6P575 273 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 PID1Q7Z2X4 250 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 ZNF567Q8N184 647 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 RNF10Q8N5U6 811 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 UBL4BQ8N7F7 174 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 ZCCHC14Q8WYQ9 949 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 RIOK2Q9BVS4 552 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 TMEM168Q9H0V1 697 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 ABCG4Q9H172 646 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 MAGEE1Q9HCI5 957 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 PKD2L2Q9NZM6 624 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 GPR34Q9UPC5 381 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 CLCA2Q9UQC9 943 aa26.26■■□□□ 1.79
TSPAN4-217ENST00000527644 TRABD2BA6NFA1 517 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 PMPCBO75439 489 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 NDST3O95803 873 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 CAPNS1P04632 268 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 NFKB1P19838 968 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 OTUD4Q01804 1114 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 EFL1Q7Z2Z2 1120 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 TAF8Q7Z7C8 310 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 ARL10Q8N8L6 244 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 ACTL9Q8TC94 416 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 NAT6Q93015 286 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 FCRL5Q96RD9 977 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 SRPK1Q96SB4 655 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 FERMT1Q9BQL6 677 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 CARS2Q9HA77 564 aaKnown RBP26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 ZFYVE1Q9HBF4 777 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 UBP1Q9NZI7 540 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 ZMIZ1Q9ULJ6 1067 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 PADI4Q9UM07 663 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 SLC17A4Q9Y2C5 497 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 ADGRG1Q9Y653 693 aa26.25■■□□□ 1.79
TSPAN4-217ENST00000527644 MT-CO3P00414 261 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 LYSMD3Q7Z3D4 306 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 DCBLD1Q8N8Z6 715 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 MAPK15Q8TD08 544 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 HIC2Q96JB3 615 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 AGAP2Q99490 1192 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 TSGA10Q9BZW7 698 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 FAM83DQ9H4H8 585 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 CCDC86Q9H6F5 360 aaKnown RBP26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 GULP1Q9UBP9 304 aa26.24■■□□□ 1.79
TSPAN4-217ENST00000527644 FTCDO95954 541 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 EPOP01588 193 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 IVLP07476 585 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 RBL1P28749 1068 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 CDCP2Q5VXM1 449 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 AADACL2Q6P093 401 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 KDELC1Q6UW63 502 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 CCDC112Q8NEF3 446 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 WDR24Q96S15 920 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 TRNAU1APQ9NX07 287 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 SIRPGQ9P1W8 387 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 SUFUQ9UMX1 484 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 KMT2BQ9UMN6 2715 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 ASXL3Q9C0F0 2248 aa26.23■■□□□ 1.79
TSPAN4-217ENST00000527644 CACNA1BQ00975 2339 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 LOC285095A0A1B0GVY8 99 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 ARHGAP6O43182 974 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 FUCA1P04066 466 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 TNNT3P45378 269 aaPredicted RBP26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 WNT3AP56704 352 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 EIF3EP60228 445 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 HENMT1Q5T8I9 393 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 OGFOD3Q6PK18 319 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 TMC3Q7Z5M5 1100 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 CDKL3Q8IVW4 592 aaPredicted RBP26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 KYQ8NBH2 561 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 FAM46DQ8NEK8 389 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 GPBAR1Q8TDU6 330 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 EID2BQ96D98 161 aa26.22■■□□□ 1.79
TSPAN4-217ENST00000527644 SCARF2Q96GP6 870 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms