RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 CARS2Q9HA77 564 aaKnown RBP20.55■□□□□ 0.88
VPS28-206ENST00000526734 MOSPD1Q9UJG1 213 aa20.55■□□□□ 0.88
VPS28-206ENST00000526734 LRP4O75096 1905 aa20.55■□□□□ 0.88
VPS28-206ENST00000526734 CLDN7O95471 211 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 CEACAM5P06731 702 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 MYF5P13349 255 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 MARCKSL1P49006 195 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 RWDD2BP57060 319 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 CYP4F3Q08477 520 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 KIF5AQ12840 1032 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 PTPRRQ15256 657 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 OGFOD3Q6PK18 319 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 TMEM139Q8IV31 216 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 SYCE1Q8N0S2 351 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 KYQ8NBH2 561 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 QKIQ96PU8 341 aaKnown RBP eCLIP20.54■□□□□ 0.88
VPS28-206ENST00000526734 CEP41Q9BYV8 373 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 MAGEE1Q9HCI5 957 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 MRPL40Q9NQ50 206 aaKnown RBP20.54■□□□□ 0.88
VPS28-206ENST00000526734 GULP1Q9UBP9 304 aa20.54■□□□□ 0.88
VPS28-206ENST00000526734 GOLGA4Q13439 2230 aaKnown RBP20.54■□□□□ 0.88
VPS28-206ENST00000526734 KNTC1P50748 2209 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 NDST3O95803 873 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 SOD1P00441 154 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 TNNT3P45378 269 aaPredicted RBP20.53■□□□□ 0.88
VPS28-206ENST00000526734 SPINT3P49223 89 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 CCDC181Q5TID7 509 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 KCTD16Q68DU8 428 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 ACRBPQ8NEB7 543 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 GPR156Q8NFN8 814 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 GPBAR1Q8TDU6 330 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 HTR3CQ8WXA8 447 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 SCAMP4Q969E2 229 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 SCARF2Q96GP6 870 aaPredicted RBP20.53■□□□□ 0.88
VPS28-206ENST00000526734 HIC2Q96JB3 615 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 LACRTQ9GZZ8 138 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 TMEM168Q9H0V1 697 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 FAM83DQ9H4H8 585 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 ZFYVE1Q9HBF4 777 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 KLHL8Q9P2G9 620 aaPredicted RBP20.53■□□□□ 0.88
VPS28-206ENST00000526734 NFKBIL1Q9UBC1 381 aaPredicted RBP20.53■□□□□ 0.88
VPS28-206ENST00000526734 SAE1Q9UBE0 346 aaPredicted RBP20.53■□□□□ 0.88
VPS28-206ENST00000526734 CD84Q9UIB8 345 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 TRHDEQ9UKU6 1024 aa20.53■□□□□ 0.88
VPS28-206ENST00000526734 TAF4O00268 1085 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 PNLIPP16233 465 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 DCDC1P59894 354 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 WASHC5Q12768 1159 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 NOMO1Q15155 1222 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 RBM44Q6ZP01 1051 aaKnown RBP20.52■□□□□ 0.88
VPS28-206ENST00000526734 LRRC57Q8N9N7 239 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 FAM46DQ8NEK8 389 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 UBE2Q2Q8WVN8 375 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 COX14Q96I36 57 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 SMIM14Q96QK8 99 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 CCDC3Q9BQI4 270 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 RIOK2Q9BVS4 552 aaKnown RBP20.52■□□□□ 0.88
VPS28-206ENST00000526734 SIRPGQ9P1W8 387 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 VPS18Q9P253 973 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 FAM153AQ9UHL3 310 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 SUFUQ9UMX1 484 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 AK5Q9Y6K8 562 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 DUSP10Q9Y6W6 482 aa20.52■□□□□ 0.88
VPS28-206ENST00000526734 MIF4GDA9UHW6 222 aaKnown RBP20.51■□□□□ 0.87
VPS28-206ENST00000526734 CSO75390 466 aaKnown RBP20.51■□□□□ 0.87
VPS28-206ENST00000526734 EPOP01588 193 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 GLB1P16278 677 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 GSDMDP57764 484 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 ADCY2Q08462 1091 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 LRP8Q14114 963 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 GALNT3Q14435 633 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 C14orf28Q4W4Y0 310 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 PERM1Q5SV97 790 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 HENMT1Q5T8I9 393 aaKnown RBP20.51■□□□□ 0.87
VPS28-206ENST00000526734 PDPK2PQ6A1A2 396 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 NYAP1Q6ZVC0 841 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 ZC3H18Q86VM9 953 aaKnown RBP20.51■□□□□ 0.87
VPS28-206ENST00000526734 LSMEM2Q8N112 164 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 OR2M4Q96R27 311 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 FCRL5Q96RD9 977 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 OSBPL8Q9BZF1 889 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 DPEP2Q9H4A9 486 aa20.51■□□□□ 0.87
VPS28-206ENST00000526734 A0A0U1RQS6 177 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 GRID2IPA4D2P6 1211 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 KRT37O76014 449 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 NFKB1P19838 968 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 GNPDA1P46926 289 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 SPIDRQ14159 915 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 LLGL1Q15334 1064 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 PCSK7Q16549 785 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 ISXQ2M1V0 245 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 CERCAMQ5T4B2 595 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 RFLNAQ6ZTI6 216 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 PID1Q7Z2X4 250 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 LYSMD3Q7Z3D4 306 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 CDKL3Q8IVW4 592 aaPredicted RBP20.5■□□□□ 0.87
VPS28-206ENST00000526734 UBL4BQ8N7F7 174 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 SPATA22Q8NHS9 363 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 CCDC74AQ96AQ1 378 aa20.5■□□□□ 0.87
VPS28-206ENST00000526734 HAUS1Q96CS2 278 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms