RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	TAF8	Q7Z7C8	310 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	PHACTR4	Q8IZ21	702 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CHPF	Q8IZ52	775 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CRYBG2	Q8N1P7	616 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	WDTC1	Q8N5D0	677 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	SCAI	Q8N9R8	606 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	IPMK	Q8NFU5	416 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	RP9	Q8TA86	221 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	ACTL9	Q8TC94	416 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZNF398	Q8TD17	642 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ATL1	Q8WXF7	558 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	IRGQ	Q8WZA9	623 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	USP7	Q93009	1102 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	C9orf72	Q96LT7	481 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	RNF157	Q96PX1	679 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	NELL2	Q99435	816 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	SNRNP25	Q9BV90	132 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	REXO4	Q9GZR2	422 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	C6orf62	Q9GZU0	229 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	DSN1	Q9H410	356 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	WDCP	Q9H6R7	721 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	C8orf33	Q9H7E9	229 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	TRMT13	Q9NUP7	481 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	NINJ2	Q9NZG7	142 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	GGA2	Q9UJY4	613 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	C3orf18	Q9UK00	162 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	TRHDE	Q9UKU6	1024 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	WBP11	Q9Y2W2	641 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	NDUFAF1	Q9Y375	327 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	PCDHA11	Q9Y5I1	949 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	EP400	Q96L91	3159 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	GNG14	A0A1W2PPG7	69 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226		A6NCN8	305 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	SAGE2P	A6NJ88	616 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ERI2	A8K979	691 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	STX16-NPEPL1	H3BU86	382 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	STX16	O14662	325 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	KPNA5	O15131	536 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CHAD	O15335	359 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	RGS14	O43566	566 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	GLP2R	O95838	553 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ABHD2	P08910	425 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CYP2A6	P11509	494 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZNF7	P17097	686 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	ALOX12	P18054	663 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	LMO2	P25791	158 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	POU1F1	P28069	291 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CAPG	P40121	348 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	GSTM5	P46439	218 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	SCTR	P47872	440 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CCNG1	P51959	295 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	NR1H2	P55055	460 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	OGDH	Q02218	1023 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	BNIP2	Q12982	314 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	FRG1	Q14331	258 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	TAF13	Q15543	124 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZNHIT3	Q15649	155 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	SWI5	Q1ZZU3	235 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	INTS6L	Q5JSJ4	861 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	GPR158	Q5T848	1215 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	PDPK2P	Q6A1A2	396 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	NPNT	Q6UXI9	565 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	RPTN	Q6XPR3	784 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZNF852	Q6ZMS4	543 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	RFX8	Q6ZV50	586 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	TMEM110	Q86TL2	294 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	METTL3	Q86U44	580 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	FAM124A	Q86V42	546 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	PIGZ	Q86VD9	579 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	GPALPP1	Q8IXQ4	340 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	SYTL1	Q8IYJ3	562 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZNF513	Q8N8E2	541 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	PDPR	Q8NCN5	879 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	PJA1	Q8NG27	643 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	MYCBPAP	Q8TBZ2	947 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	KCTD13	Q8WZ19	329 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	RIT1	Q92963	219 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	WNT8B	Q93098	351 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	NKD2	Q969F2	451 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	ATXN7L3B	Q96GX2	97 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	COX4I2	Q96KJ9	171 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	TEKT5	Q96M29	485 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ACBD6	Q9BR61	282 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ULBP1	Q9BZM6	244 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	PAIP1	Q9H074	479 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	NOL6	Q9H6R4	1146 aa	Known RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	REEP1	Q9H902	201 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	TCF7L2	Q9NQB0	619 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZDHHC18	Q9NUE0	388 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	THAP1	Q9NVV9	213 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	CLN6	Q9NWW5	311 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	GRHL1	Q9NZI5	618 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	STOX2	Q9P2F5	926 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	RCOR3	Q9P2K3	495 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	TBC1D14	Q9P2M4	693 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	MARCO	Q9UEW3	520 aa	Predicted RBP	2.59	□□□□□ -2
PCM1-222	ENST00000524226	CYTH4	Q9UIA0	394 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ATPIF1	Q9UII2	106 aa		2.59	□□□□□ -2
PCM1-222	ENST00000524226	ZNF232	Q9UNY5	417 aa		2.59	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms