RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MSLNQ13421 630 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-224ENST00000523873 SEMA5AQ13591 1074 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 NFATC4Q14934 902 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 ENPP7Q6UWV6 458 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 HEATR4Q86WZ0 1026 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 KLHL7Q8IXQ5 586 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 RBFAQ8N0V3 343 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 FAM174AQ8TBP5 190 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
VEGFA-224ENST00000523873 TSACCQ96A04 125 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-224ENST00000523873 CAMK1GQ96NX5 476 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 PPP1R2P1Q96PQ5 205 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 FAM83DQ9H4H8 585 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 SUDS3Q9H7L9 328 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-224ENST00000523873 MRPL40Q9NQ50 206 aaKnown RBP12.78□□□□□ -0.36
VEGFA-224ENST00000523873 ARL5AQ9Y689 179 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 TCRBV7S3A2A0A539 114 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 CCDC78A2IDD5 438 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 TMEM202A6NGA9 273 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 CACNB4O00305 520 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-224ENST00000523873 SLC30A4O14863 429 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 PSMD3O43242 534 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 APRTP07741 180 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 EPHA8P29322 1005 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-224ENST00000523873 KIAA1024LP59773 190 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 TMPRSS15P98073 1019 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 CDK3Q00526 305 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 GPS1Q13098 491 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 PTK2BQ14289 1009 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 HS1BP3Q53T59 392 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-224ENST00000523873 HENMT1Q5T8I9 393 aaKnown RBP12.77□□□□□ -0.37
VEGFA-224ENST00000523873 DOK6Q6PKX4 331 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 MACC1Q6ZN28 852 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 ZNF765Q7L2R6 523 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 PARGQ86W56 976 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 NRSN1Q8IZ57 195 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 SPATA16Q9BXB7 569 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 TEX101Q9BY14 249 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 WDR26Q9H7D7 661 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 ERVMER34-1Q9H9K5 563 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 HACD3Q9P035 362 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 BTBD3Q9Y2F9 522 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
VEGFA-224ENST00000523873 CEP250Q9BV73 2442 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 PIEZO1Q92508 2521 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 CCL22O00626 93 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 GPR39O43194 453 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 SH3BP5O60239 455 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 MYCLP1P12525 358 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-224ENST00000523873 JUNDP17535 347 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 KCNA4P22459 653 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 CA5AP35218 305 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 TRIM23P36406 574 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 PTGIRP43119 386 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 RXRGP48443 463 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 POLD2P49005 469 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 FNTAP49354 379 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 DPTQ07507 201 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 C1orf61Q13536 156 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 SEPT6Q14141 434 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 POU6F1Q14863 301 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 CERCAMQ5T4B2 595 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 DCP2Q8IU60 420 aaKnown RBP12.76□□□□□ -0.37
VEGFA-224ENST00000523873 HID1Q8IV36 788 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 PHACTR4Q8IZ21 702 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 OR13C4Q8NGS5 318 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 SAP25Q8TEE9 199 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 OR1E3Q8WZA6 343 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 PDXPQ96GD0 296 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 WDR92Q96MX6 357 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 SRPK1Q96SB4 655 aaKnown RBP12.76□□□□□ -0.37
VEGFA-224ENST00000523873 TRABDQ9H4I3 376 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 ARNT2Q9HBZ2 717 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 FGF22Q9HCT0 170 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-224ENST00000523873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.76□□□□□ -0.37
VEGFA-224ENST00000523873 IL17CQ9P0M4 197 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 KLQ9UEF7 1012 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 MOSPD1Q9UJG1 213 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 TMEM98Q9Y2Y6 226 aa12.76□□□□□ -0.37
VEGFA-224ENST00000523873 TOR1BO14657 336 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 TM4SF5O14894 197 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 FFAR2O15552 330 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 PIAS2O75928 621 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 SUN1O94901 812 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 CSF2P04141 144 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 CELA2BP08218 269 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-224ENST00000523873 ZNF883P0CG24 379 aa12.75□□□□□ -0.37
VEGFA-224ENST00000523873 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
VEGFA-224ENST00000523873 COL5A1P20908 1838 aaPredicted RBP12.75□□□□□ -0.37
VEGFA-224ENST00000523873 LPOP22079 712 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms