RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	TCAF1	Q9Y4C2	921 aa		11.92	□□□□□ -0.5
PVT1-215	ENST00000522963	CACNA1E	Q15878	2313 aa		11.92	□□□□□ -0.5
PVT1-215	ENST00000522963		A0A1B0GVT2	93 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963		A0A1W2PQU0	124 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CCDC78	A2IDD5	438 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	C4orf47	A7E2U8	309 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	EIF3H	O15372	352 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	SLC31A1	O15431	190 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CTIF	O43310	598 aa	Known RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	TSPAN6	O43657	245 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	FOXD2	O60548	495 aa	Predicted RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	MMP20	O60882	483 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CRTAM	O95727	393 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	FAM153B	P0C7A2	387 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ZNF30	P17039	623 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ENG	P17813	658 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	GM2A	P17900	193 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ADRA1D	P25100	572 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	HOXD12	P35452	270 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ELK3	P41970	407 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	LIG3	P49916	1009 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CCR5	P51681	352 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ZNF140	P52738	457 aa	Predicted RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	STC1	P52823	247 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	PTS	Q03393	145 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ARHGEF7	Q14155	803 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	PTPRCAP	Q14761	206 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	TEAD4	Q15561	434 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	FAM153C	Q494X1	144 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	SLC23A3	Q6PIS1	610 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	RFLNA	Q6ZTI6	216 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	HSD11B1L	Q7Z5J1	315 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CCDC25	Q86WR0	208 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ANKMY2	Q8IV38	441 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	PPHLN1	Q8NEY8	458 aa	Known RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CXorf40A	Q8TE69	158 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	SERAC1	Q96JX3	654 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ZNF778	Q96MU6	729 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	SLC6A18	Q96N87	628 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	EBNA1BP2	Q99848	306 aa	Known RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	TRIM56	Q9BRZ2	755 aa	Known RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	KIFC1	Q9BW19	673 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	PHACTR1	Q9C0D0	580 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	EBF2	Q9HAK2	575 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ZFYVE1	Q9HBF4	777 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	PREB	Q9HCU5	417 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	TM9SF3	Q9HD45	589 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	SAYSD1	Q9NPB0	183 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CHRAC1	Q9NRG0	131 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	RAB21	Q9UL25	225 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	SOX13	Q9UN79	622 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ZFR2	Q9UPR6	939 aa	Known RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	CHMP2B	Q9UQN3	213 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	MAD1L1	Q9Y6D9	718 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	TEX264	Q9Y6I9	313 aa		11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	ASCC3	Q8N3C0	2202 aa	Known RBP	11.91	□□□□□ -0.5
PVT1-215	ENST00000522963	MYO15A	Q9UKN7	3530 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963		A0A1W2PPC4	97 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	HEATR9	A2RTY3	570 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	IGLON5	A6NGN9	336 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	MROH6	A6NGR9	719 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	GOLGA8CP	A6NN73	597 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	C2orf81	A6NN90	581 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	SYP	P08247	313 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	ELFN1	P0C7U0	828 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	C6	P13671	934 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	LPO	P22079	712 aa	Predicted RBP	11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	ID4	P47928	161 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	TSTD2	Q5T7W7	516 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	STPG1	Q5TH74	334 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	SEL1L3	Q68CR1	1132 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	CASC4	Q6P4E1	433 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	CES3	Q6UWW8	571 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	MICALCL	Q6ZW33	695 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	HORMAD1	Q86X24	394 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	ZBED8	Q8IZ13	594 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	FBXO36	Q8NEA4	188 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	OR13C4	Q8NGS5	318 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	NETO1	Q8TDF5	533 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	PTCD2	Q8WV60	388 aa	Known RBP	11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	LRRC39	Q96DD0	335 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	STAMBPL1	Q96FJ0	436 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	DNAJC1	Q96KC8	554 aa	Known RBP	11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	COQ10A	Q96MF6	247 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	KDM4C	Q9H3R0	1056 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	PLAC1	Q9HBJ0	212 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	MRM3	Q9HC36	420 aa	Known RBP	11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	CAPN10	Q9HC96	672 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	BPIFA1	Q9NP55	256 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	FZD3	Q9NPG1	666 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	TMEM9B	Q9NQ34	198 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	IL17C	Q9P0M4	197 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	SAMD15	Q9P1V8	674 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	SLC2A6	Q9UGQ3	507 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	CA5B	Q9Y2D0	317 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	COQ6	Q9Y2Z9	468 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	ZNF292	O60281	2723 aa		11.9	□□□□□ -0.5
PVT1-215	ENST00000522963	SPTBN4	Q9H254	2564 aa		11.89	□□□□□ -0.51
PVT1-215	ENST00000522963	TMEM131	Q92545	1883 aa		11.89	□□□□□ -0.51

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