RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TBC1D3KA0A087X1G2 549 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TBC1D3FA6NER0 549 aaPredicted RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 FAM159BA6NKW6 160 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TBC1D3LB9A6J9 549 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 POC1B-GALNT4F8VUJ3 575 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 H0Y858 1186 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 SLC7A4O43246 635 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TSPAN6O43657 245 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 APBB3O95704 486 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 NUDT17P0C025 328 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TBC1D3HP0C7X1 549 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 UGT1A6P19224 532 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 UGT1A1P22309 533 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 UGT1A4P22310 534 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 MC4RP32245 332 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 UGT1A3P35503 534 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 UGT1A5P35504 534 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 HADHAP40939 763 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 CHRNA6Q15825 494 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TEDDM1Q5T9Z0 273 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 PDPK2PQ6A1A2 396 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TBC1D3GQ6DHY5 549 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TBC1D3CQ6IPX1 549 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 DENND6AQ8IWF6 608 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 CTAGE3PQ8IX95 158 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TBC1D3Q8IZP1 549 aaPredicted RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 PPM1NQ8N819 430 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 PKD2L2Q9NZM6 624 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 INVSQ9Y283 1065 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 ZDBF2Q9HCK1 2354 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 H7C0S8 307 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 K7ESF4 209 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 WNT9AO14904 365 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 LZTS3O60299 673 aaPredicted RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 FAM155BO75949 473 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 SPAM1P38567 509 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 CTBP1Q13363 440 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 THOC5Q13769 683 aaKnown RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 FRG1Q14331 258 aaKnown RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 SEMA3AQ14563 771 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 ZRANB3Q5FWF4 1079 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 TSSK4Q6SA08 328 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 CYS1Q717R9 158 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 OR4L1Q8NH43 312 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 EPS8L3Q8TE67 593 aaKnown RBP13.34□□□□□ -0.27
CLK4-210ENST00000522136 CYTH2Q99418 400 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 ABCG8Q9H221 673 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 A0A0C4DFX4 3053 aa13.34□□□□□ -0.27
CLK4-210ENST00000522136 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 PLXNA2O75051 1894 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 GLYATL1P3A0A0U1RQE8 302 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 EXOC1LA0A1B0GW35 172 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 A0A1W2PQU0 124 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 PSMD11O00231 422 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 SRP72O76094 671 aaKnown RBP13.33□□□□□ -0.28
CLK4-210ENST00000522136 GCAP28676 217 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 MAT2AP31153 395 aaKnown RBP13.33□□□□□ -0.28
CLK4-210ENST00000522136 FOXN2P32314 431 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 SLCO1A2P46721 670 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 PPP2CBP62714 309 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 PPP2CAP67775 309 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 DMWDQ09019 674 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 IFFO1Q0D2I5 559 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 FGL2Q14314 439 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 ZNF470Q6ECI4 717 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 PIANPQ8IYJ0 282 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 OTUD6BQ8N6M0 293 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 DTD2Q96FN9 168 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 RIOK2Q9BVS4 552 aaKnown RBP13.33□□□□□ -0.28
CLK4-210ENST00000522136 BTBD1Q9H0C5 482 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 FAM83DQ9H4H8 585 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 ZFATQ9P243 1243 aa13.33□□□□□ -0.28
CLK4-210ENST00000522136 TLDC2A0PJX2 215 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 MAP2K7O14733 419 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
CLK4-210ENST00000522136 PRAMEF1O95521 474 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 ABCG1P45844 678 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 CCR3P51677 355 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 CLCN5P51795 746 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 MPP1Q00013 466 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 SFSWAPQ12872 951 aaKnown RBP13.32□□□□□ -0.28
CLK4-210ENST00000522136 STAT4Q14765 748 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 PSAPL1Q6NUJ1 521 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 TMEM105Q8N8V8 129 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 TOE1Q96GM8 510 aaKnown RBP13.32□□□□□ -0.28
CLK4-210ENST00000522136 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 EPHX3Q9H6B9 360 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
CLK4-210ENST00000522136 VPS18Q9P253 973 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms