RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 HERC2P3Q9BVR0 1158 aa8.7□□□□□ -1.02
CSMD1-206ENST00000520002 RIOX1Q9H6W3 641 aa8.7□□□□□ -1.02
CSMD1-206ENST00000520002 MKLN1Q9UL63 735 aa8.7□□□□□ -1.02
CSMD1-206ENST00000520002 PEX16Q9Y5Y5 336 aa8.7□□□□□ -1.02
CSMD1-206ENST00000520002 MOXD2PA6NHM9 499 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 AIREO43918 545 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 CRYZL1O95825 349 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 LINC00032P0C843 101 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 NT5DC1Q5TFE4 455 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SYT12Q8IV01 421 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 DSELQ8IZU8 1212 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 GHDCQ8N2G8 530 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ZNF318Q5VUA4 2279 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ILVBLA1L0T0 632 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 OMPP47874 163 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 IL2P60568 153 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ZNF549Q6P9A3 640 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ZNF517Q6ZMY9 492 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 PTCD3Q96EY7 689 aaKnown RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SPATC1LQ9H0A9 340 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 OR56A5P0C7T3 313 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 CDH1P12830 882 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 BDNFP23560 247 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ZNF268Q14587 947 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 FAM187BQ17R55 369 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ETNPPLQ8TBG4 499 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SLC35C1Q96A29 364 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ZFP14Q9HCL3 533 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 IL17RBQ9NRM6 502 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 FARSBQ9NSD9 589 aaKnown RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 KLQ9UEF7 1012 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 A0A0B4J269 797 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 MID1O15344 667 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 CYP1A1P04798 512 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 PRG2P13727 222 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 NFKB1P19838 968 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 NTSP30990 170 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ANKRD26P1Q6NSI1 321 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 NEPROQ6NW34 567 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 FBXO42Q6P3S6 717 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 C7orf57Q8NEG2 295 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 COL26A1Q96A83 441 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 PPM1HQ9ULR3 514 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 PCDHB5Q9Y5E4 795 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 IGSF6O95976 241 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 NUDT17P0C025 328 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 GCNT1Q02742 428 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SEC23AQ15436 765 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SLC1A5Q15758 541 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 FNDC3BQ53EP0 1204 aaKnown RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ACSBG2Q5FVE4 666 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ATL1Q8WXF7 558 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 BTBD9Q96Q07 612 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 IL22Q9GZX6 179 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 EBF2Q9HAK2 575 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 CCNB1IP1Q9NPC3 277 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 GRIN2DO15399 1336 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ASTN2O75129 1339 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 RPN2P04844 631 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SLC18A2Q05940 514 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SLC34A3Q8N130 599 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ASCC1Q8N9N2 400 aaKnown RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 GPR156Q8NFN8 814 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 TNFAIP8L1Q8WVP5 186 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 KIDINS220Q9ULH0 1771 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SNX4O95219 450 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SLC26A2P50443 739 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 CXXC5Q7LFL8 322 aaKnown RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 FAM220AQ7Z4H9 259 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ITM2CQ9NQX7 267 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 NTRK1P04629 796 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 HNRNPLP14866 589 aaKnown RBP eCLIP8.69□□□□□ -1.022e-7■■■■□ 19.3
CSMD1-206ENST00000520002 CDK9P50750 372 aaKnown RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 TMPRSS11AQ6ZMR5 421 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 BEX2Q9BXY8 128 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 TKTL2Q9H0I9 626 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 PCDHA11Q9Y5I1 949 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 ANKRD26Q9UPS8 1709 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 H7C2Y5 167 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 PEX11AO75192 247 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 EPORP19235 508 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 RBL1P28749 1068 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 E2F2Q14209 437 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 TOR1AIP1Q5JTV8 583 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 VWA5B1Q5TIE3 1220 aa8.69□□□□□ -1.02
CSMD1-206ENST00000520002 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 SMPD3Q9NY59 655 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-206ENST00000520002 H6PDO95479 791 aa8.68□□□□□ -1.02
CSMD1-206ENST00000520002 RPS3P23396 243 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSMD1-206ENST00000520002 IGFBP5P24593 272 aa8.68□□□□□ -1.02
CSMD1-206ENST00000520002 PSMD5Q16401 504 aa8.68□□□□□ -1.02
CSMD1-206ENST00000520002 WSCD2Q2TBF2 565 aa8.68□□□□□ -1.02
CSMD1-206ENST00000520002 EARS2Q5JPH6 523 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms