RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 EPOP01588 193 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 ZNF37AP17032 561 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 OGNP20774 298 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 NME5P56597 212 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 PLOD1Q02809 727 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 ACVR1Q04771 509 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 NFE2Q16621 373 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 EML3Q32P44 896 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 PARP15Q460N3 678 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 VPS26BQ4G0F5 336 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SLC39A12Q504Y0 691 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 NHSL2Q5HYW2 709 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 KANK2Q63ZY3 851 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CYHR1Q6ZMK1 362 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 LPCAT2Q7L5N7 544 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 MFSD2AQ8NA29 543 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 OR4L1Q8NH43 312 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 BRSK1Q8TDC3 778 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 LZICQ8WZA0 190 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 TFAP2CQ92754 450 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 OLAHQ9NV23 265 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 MARCH4Q9P2E8 410 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CIDEBQ9UHD4 219 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 OR51F1A6NGY5 319 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SYCE1LA8MT33 242 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CCL22O00626 93 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 NME4O00746 187 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 GIPC1O14908 333 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 BMP10O95393 424 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CHEK2O96017 543 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 GPIP06744 558 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 C7P10643 843 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 HGFP14210 728 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CKMT2P17540 419 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 ETFBP38117 255 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 ALDH3B2P48448 385 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 PGFP49763 221 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SUOXP51687 545 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 KCNK10P57789 538 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 YBEYP58557 167 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 GRIK2Q13002 908 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 ZNF235Q14590 738 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 LCN8Q6JVE9 175 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 TTC33Q6PID6 262 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SPATA19Q7Z5L4 167 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SERINC5Q86VE9 423 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SLC15A3Q8IY34 581 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 BBS5Q8N3I7 341 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 C2orf69Q8N8R5 385 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 LRRC58Q96CX6 371 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 CENPNQ96H22 339 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 DNAJC1Q96KC8 554 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SEMA3CQ99985 751 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 SDR39U1Q9NRG7 319 aaPredicted RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 OLA1Q9NTK5 396 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 INTS10Q9NVR2 710 aaKnown RBP11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 MAP10Q9P2G4 905 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
NUDCD1-203ENST00000519607 IGLV3-10A0A075B6K4 115 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 UBXN8O00124 270 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 SOCS2O14508 198 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 ATXN1LP0C7T5 689 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 CD52P31358 61 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 SLC5A2P31639 672 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 THPOP40225 353 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 CLCQ05315 142 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 RAD51Q06609 339 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 LCP2Q13094 533 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 ALFQ53S48 1182 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 ANKS6Q68DC2 871 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 FBXO39Q8N4B4 442 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 ARRDC2Q8TBH0 407 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 TADA1Q96BN2 335 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 FUBP3Q96I24 572 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■■■■■ 29.3
NUDCD1-203ENST00000519607 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 TAS2R13Q9NYV9 303 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 KCTD3Q9Y597 815 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 ANKRD36A6QL64 1941 aa11.31□□□□□ -0.6
NUDCD1-203ENST00000519607 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms