RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 CDC16Q13042 620 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC12A1Q13621 1099 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 MTFR2Q6P444 385 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 C22orf39Q6P5X5 142 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 MED25Q71SY5 747 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 RASGRP3Q8IV61 690 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 DMRTC2Q8IXT2 367 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 CATSPER1Q8NEC5 780 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 OR56A4Q8NGH8 313 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 KIAA1524Q8TCG1 905 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 RNF139Q8WU17 664 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 NR4A3Q92570 626 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 TAF4BQ92750 862 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 CCDC127Q96BQ5 260 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF559Q9BR84 538 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 CHST8Q9H2A9 424 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 RWDD1Q9H446 243 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 SUDS3Q9H7L9 328 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 OLA1Q9NTK5 396 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 LRFN1Q9P244 771 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC25A13Q9UJS0 675 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
CTNNA1-216ENST00000519489 MYH11P35749 1972 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF233A6NK53 670 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ADAM10O14672 748 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 KIF1CO43896 1103 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 TM7SF2O76062 418 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ANKRD34CP0C6C1 535 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ATICP31939 592 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 SCNN1AP37088 669 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 SEPHS1P49903 392 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 SMSP52788 366 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 DGKQP52824 942 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 GPS2Q13227 327 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 KCNAB1Q14722 419 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 LRRC14Q15048 493 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF699Q32M78 642 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC30A9Q6PML9 568 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 TMEM207Q6UWW9 146 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ZSCAN30Q86W11 494 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 UNC93AQ86WB7 457 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 UNC45BQ8IWX7 931 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 GALNT16Q8N428 558 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ENDOVQ8N8Q3 282 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 OR6K2Q8NGY2 324 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 SEC14L1Q92503 715 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 SYAP1Q96A49 352 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 ACCSQ96QU6 501 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 BRMS1Q9HCU9 246 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 OGFRQ9NZT2 677 aa6.73□□□□□ -1.33
CTNNA1-216ENST00000519489 NEMP1O14524 444 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 BUB1BO60566 1050 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF202O95125 648 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 PCCBP05166 539 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TPOP07202 933 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TNNI1P19237 187 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 HTR1BP28222 390 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 CCNHP51946 323 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 FOXL2P58012 376 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 RPS15P62841 145 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TYRO3Q06418 890 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 INCA1Q0VD86 236 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 ORC2Q13416 577 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TRPC3Q13507 836 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TRIM29Q14134 588 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 IL11RAQ14626 422 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF169Q14929 603 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 PSMD6Q15008 389 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF667Q5HYK9 610 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 ARTNQ5T4W7 220 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 XP32Q5T750 250 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 CPLX2Q6PUV4 134 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 IGFL2Q6UWQ7 119 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 CERS6Q6ZMG9 384 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 UBR7Q8N806 425 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 BCORP1Q8N888 145 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 DNAAF3Q8N9W5 541 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 ACRBPQ8NEB7 543 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 DNAJB14Q8TBM8 379 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC37A2Q8TED4 501 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 PPP4R1Q8TF05 950 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 CLEC4CQ8WTT0 213 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 PPP1R16AQ96I34 528 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 AGAP3Q96P47 875 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 SLC30A3Q99726 388 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 HEPHQ9BQS7 1158 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 MENTQ9BUN1 341 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 C19orf24Q9BVV8 132 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 UBXN6Q9BZV1 441 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 PHACTR1Q9C0D0 580 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TKTL2Q9H0I9 626 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 BRD7Q9NPI1 651 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 HECAQ9UBI9 543 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 VPS28Q9UK41 221 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 TCFL5Q9UL49 500 aa6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 G3BP2Q9UN86 482 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-216ENST00000519489 A0A0D9SEW6 157 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms