RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 Q8NA96 180 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 RNF149Q8NC42 400 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GPRC5AQ8NFJ5 357 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNF564Q8TBZ8 553 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ATG4AQ8WYN0 398 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GLG1Q92896 1179 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CD101Q93033 1021 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CAVIN3Q969G5 261 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ZBTB9Q96C00 473 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNF653Q96CK0 615 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 RNF31Q96EP0 1072 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 GDAP1L1Q96MZ0 367 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 C7orf26Q96N11 449 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 FNBP1Q96RU3 617 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 DCLRE1CQ96SD1 692 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 C17orf80Q9BSJ5 609 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 NUP85Q9BW27 656 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 AP1M1Q9BXS5 423 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MTMR12Q9C0I1 747 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 ABHD16BQ9H3Z7 469 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 PLEKHA4Q9H4M7 779 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 CCDC134Q9H6E4 229 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MINDY3Q9H8M7 445 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 VIPAS39Q9H9C1 493 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 LIN7CQ9NUP9 197 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TMLHEQ9NVH6 421 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TRPM5Q9NZQ8 1165 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 AMFRQ9UKV5 643 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 TTC7AQ9ULT0 858 aaPredicted RBP4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 SORCS3Q9UPU3 1222 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 PLXNB2O15031 1838 aa4.97□□□□□ -1.61
CTNNA1-212ENST00000518919 MYH9P35579 1960 aaKnown RBP4.96□□□□□ -1.61
CTNNA1-212ENST00000518919 ZNFX1Q9P2E3 1918 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 A0A087X0M5 115 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 A0A1B0GX30 115 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 NPEPPSL1A6NEC2 478 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SLC38A8A6NNN8 435 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 OGTO15294 1046 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 POLR3GO15318 223 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 HBP1O60381 514 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 TOM1L1O75674 476 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SNAI1O95863 264 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SYF2O95926 243 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 ASS1P00966 412 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 GH1P01241 217 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 ELANEP08246 267 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 IQCF3P0C7M6 154 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CETPP11597 493 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 TNNI1P19237 187 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 COMTP21964 271 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CTNNA2P26232 953 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 RAP1GAPP47736 663 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SLC26A2P50443 739 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CDK7P50613 346 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CASP6P55212 293 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 PTENP60484 403 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CXADRP78310 365 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 GPC5P78333 572 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 GUCY2DQ02846 1103 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 DMTNQ08495 405 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 GALNT2Q10471 571 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 PTP4A2Q12974 167 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 FHL3Q13643 280 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 MXD4Q14582 209 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SIX1Q15475 284 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 KCTD19Q17RG1 926 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 FAM153CQ494X1 144 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 TMEM196Q5HYL7 178 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 ATF7IP2Q5U623 682 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 NAA35Q5VZE5 725 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 AADACL2Q6P093 401 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 EMBQ6PCB8 327 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SPOCD1Q6ZMY3 1216 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 Q6ZRM9 215 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 HTR3DQ70Z44 454 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 GDF7Q7Z4P5 450 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 GPR142Q7Z601 462 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 WDR49Q8IV35 697 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 ZBTB8OSQ8IWT0 167 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 IZUMO1Q8IYV9 350 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 BHLHE22Q8NFJ8 381 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 PPTC7Q8NI37 304 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 SLC22A17Q8WUG5 538 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 TCP11Q8WWU5 503 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 FAM136AQ96C01 138 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 MCRS1Q96EZ8 462 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 REXO5Q96IC2 774 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 FAM81BQ96LP2 452 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 NLRP4Q96MN2 994 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 HAPLN3Q96S86 360 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 TRIM51Q9BSJ1 452 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 MECRQ9BV79 373 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 TRIM7Q9C029 511 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 DDX47Q9H0S4 455 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 C2orf40Q9H1Z8 148 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CDT1Q9H211 546 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 CARD9Q9H257 536 aa4.96□□□□□ -1.62
CTNNA1-212ENST00000518919 NEUROG2Q9H2A3 272 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms