RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 DTD2Q96FN9 168 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 SCARF2Q96GP6 870 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 OR2M4Q96R27 311 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 SELENOOQ9BVL4 669 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 NAA15Q9BXJ9 866 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 EPB41L1Q9H4G0 881 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 GOLGA6AQ9NYA3 693 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 KCND3Q9UK17 655 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 CELSR2Q9HCU4 2923 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 CRYBG3Q68DQ2 2970 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 ANKRD62A6NC57 917 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 SOCS5O75159 536 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 HEXIM1O94992 359 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DDAH2O95865 285 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 PYGLP06737 847 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 ANKRD34CP0C6C1 535 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 CYP2A6P11509 494 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 UCHL3P15374 230 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DESP17661 470 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 RFC1P35251 1148 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DLSTP36957 453 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 ETV3P41162 512 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 NSFP46459 744 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 POLD2P49005 469 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 SCNN1BP51168 640 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 PMS2P54278 862 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 TPI1P60174 286 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 CDR2Q01850 454 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 HHEXQ03014 270 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DPTQ07507 201 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 TPD52L1Q16890 204 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 VWA3BQ502W6 1294 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DENND2CQ68D51 928 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DPY19L2P1Q6NXN4 242 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 SCYL2Q6P3W7 929 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 LZTR1Q8N653 840 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 C3orf20Q8ND61 904 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 PTCD2Q8WV60 388 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 NCSTNQ92542 709 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 STK33Q9BYT3 514 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 ULBP3Q9BZM4 244 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 SP110Q9HB58 689 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 APMAPQ9HDC9 416 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 SARS2Q9NP81 518 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 NOCTQ9UK39 431 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 FZD10Q9ULW2 581 aa11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 MRPS18BQ9Y676 258 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-203ENST00000517667 DOPEY1Q5JWR5 2465 aa11.4□□□□□ -0.59
TRAPPC9-203ENST00000517667 EIF3CLB5ME19 914 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 K7EM74 188 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 MAP3K6O95382 1288 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 RECKO95980 971 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 CPP00450 1065 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 CALB1P05937 261 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC2A4P14672 509 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 PAPOLAP51003 745 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 ZNF143P52747 638 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 IL10RBQ08334 325 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 ERV3-1Q14264 604 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 WDR59Q6PJI9 974 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 DOK6Q6PKX4 331 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 C6orf15Q6UXA7 325 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 ADAMTSL4Q6UY14 1074 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 LYSMD3Q7Z3D4 306 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 ZNF761Q86XN6 746 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 GALNT13Q8IUC8 556 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 APLFQ8IW19 511 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 AVL9Q8NBF6 648 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC30A5Q8TAD4 765 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC20A1Q8WUM9 679 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 SEC14L1Q92503 715 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 STAMBPL1Q96FJ0 436 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 CELF6Q96J87 481 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 PSKH2Q96QS6 385 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 EIF3CQ99613 913 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 ADAM22Q9P0K1 906 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 TLK1Q9UKI8 766 aa11.39□□□□□ -0.59
TRAPPC9-203ENST00000517667 MN1Q10571 1320 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 SIGLEC16A6NMB1 481 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 CCP110O43303 1012 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 HTRA2O43464 458 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 F8A1P23610 371 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 HSPA9P38646 679 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 GPR1P46091 355 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 FMO1Q01740 532 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 FOXM1Q08050 763 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 PYCR3Q53H96 274 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 MIIPQ5JXC2 388 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 HSD11B1LQ7Z5J1 315 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 SLC9B2Q86UD5 537 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 PLXDC1Q8IUK5 500 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 CBARPQ8N350 705 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 PDCD6IPQ8WUM4 868 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 HERPUD2Q9BSE4 406 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 TUBGCP2Q9BSJ2 902 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 TWSG1Q9GZX9 223 aa11.38□□□□□ -0.59
TRAPPC9-203ENST00000517667 SIDT1Q9NXL6 827 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms