RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ZNF667Q5HYK9 610 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZNF544Q6NX49 715 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SPATA8Q6RVD6 105 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 REG3GQ6UW15 175 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KRBA2Q6ZNG9 492 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 Q6ZRP5 223 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CDHR3Q6ZTQ4 885 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ASB18Q6ZVZ8 466 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MIGA2Q7L4E1 593 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PLPPR4Q7Z2D5 763 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KCNK18Q7Z418 384 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 FAM90A1Q86YD7 464 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TMTC1Q8IUR5 882 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 HACE1Q8IYU2 909 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RNF113BQ8IZP6 322 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CPA6Q8N4T0 437 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZNF709Q8N972 641 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 EXD3Q8N9H8 876 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KIAA0895Q8NCT3 520 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 GMCL1P1Q8NEA9 526 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CEP70Q8NHQ1 597 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 FLVCR1-AS1Q8TAF5 88 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DNAJB14Q8TBM8 379 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SNRNP27Q8WVK2 155 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RSC1A1Q92681 617 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ABTB1Q969K4 478 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 GPRASP2Q96D09 838 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 LINGO1Q96FE5 620 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PDXPQ96GD0 296 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 AGAP4Q96P64 663 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 NABP2Q9BQ15 211 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZNF649Q9BS31 505 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SYT17Q9BSW7 474 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DGCR6LQ9BY27 220 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DEFB126Q9BYW3 111 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ADNPQ9H2P0 1102 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SEBOXQ9HB31 216 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 NOD2Q9HC29 1040 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZBTB20Q9HC78 741 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TRIM39Q9HCM9 518 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 OR6C3Q9NZP0 311 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KLHL42Q9P2K6 505 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MBD2Q9UBB5 411 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 XPR1Q9UBH6 696 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PADI1Q9ULC6 663 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CLEC4EQ9ULY5 219 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 VPS4AQ9UN37 437 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ABCG2Q9UNQ0 655 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DNAJC16Q9Y2G8 782 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RIPK3Q9Y572 518 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PCDHGB7Q9Y5F8 929 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ROS1P08922 2347 aa-0.78□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZANQ9Y493 2812 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CCDC88CQ9P219 2028 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 A8MX80 341 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 AKR1B15C9JRZ8 316 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 AGPSO00116 658 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CHL1O00533 1208 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 KIF3BO15066 747 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 EIF3DO15371 548 aaKnown RBP eCLIP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ADAM12O43184 909 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HSPA12AO43301 675 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PLRG1O43660 514 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GAS7O60861 476 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SRGAP2O75044 1071 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CDC123O75794 336 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMCC1O94876 653 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 UNC5CO95185 931 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 POP4O95707 220 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PARP1P09874 1014 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FAM200BP0CF97 657 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMEM225BP0DP42 221 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GP1BBP13224 206 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LIFP15018 202 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 S1PR1P21453 382 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PRDX5P30044 214 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MAGEB1P43366 347 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CTCFP49711 727 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GATMP50440 423 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SUOXP51687 545 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CLCN4P51793 760 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PGDP52209 483 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 KPNA1P52294 538 aaPredicted RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SLC5A3P53794 718 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 STX17P56962 302 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GNB2P62879 340 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PAX5Q02548 391 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF543Q08ER8 600 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GTF2H2Q13888 395 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ARHGEF7Q14155 803 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SF3A1Q15459 793 aaKnown RBP-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MPPED2Q15777 294 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IL17AQ16552 155 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 AAK1Q2M2I8 961 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF394Q53GI3 561 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PAPPA-AS1Q5QFB9 102 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 NCAPH2Q6IBW4 605 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FAM71E1Q6IPT2 247 aa-0.79□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LCN10Q6JVE6 187 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms