RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 PDCD6IPQ8WUM4 868 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RNF141Q8WVD5 230 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 C1orf54Q8WWF1 131 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GAB3Q8WWW8 586 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MAML1Q92585 1016 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ARRDC3Q96B67 414 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HDAC11Q96DB2 347 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TOE1Q96GM8 510 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PPP1R16AQ96I34 528 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LRIG1Q96JA1 1093 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PBKQ96KB5 322 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KLHL32Q96NJ5 620 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AGAP3Q96P47 875 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OLFM3Q96PB7 478 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PSKH2Q96QS6 385 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SEMA3CQ99985 751 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FERMT1Q9BQL6 677 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GPR174Q9BXC1 333 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ASPNQ9BXN1 380 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CEP41Q9BYV8 373 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRDM14Q9GZV8 571 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BTBD1Q9H0C5 482 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KCNH6Q9H252 994 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CARD9Q9H257 536 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PABPC3Q9H361 631 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SEMA6CQ9H3T2 930 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AKTIPQ9H8T0 292 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CD93Q9NPY3 652 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HAUS2Q9NVX0 235 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KLHL8Q9P2G9 620 aaPredicted RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LHX3Q9UBR4 397 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SARDHQ9UL12 918 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RAB23Q9ULC3 237 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SCML1Q9UN30 329 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PCDHGA2Q9Y5H1 932 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3DA0A087WVF3 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3IA0A087WXS9 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3EA0A087X179 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3KA0A087X1G2 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 IGHV1OR15-9A0A0B4J2B8 117 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CTAGE9A4FU28 777 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3FA6NER0 549 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRR23AA6NEV1 266 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LRRC72A6NJI9 287 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 C16orf96A6NNT2 1141 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3LB9A6J9 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RNF103O00237 685 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NEMP1O14524 444 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GNB5O14775 395 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MUSKO15146 869 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KCNN4O15554 427 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MTSS1O43312 755 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RHOBTB1O94844 696 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PIGNO95427 931 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HLA-DQB2P05538 268 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3HP0C7X1 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CPEP16870 476 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BCKDHBP21953 392 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PTPN3P26045 913 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SERPINA4P29622 427 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CASQ1P31415 396 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ACSL1P33121 698 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 P2RY2P41231 377 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CSNK1DP48730 415 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DHPSP49366 369 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 METAP1P53582 386 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 IFI35P80217 286 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DSC2Q02487 901 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF33AQ06730 810 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZBTB17Q13105 803 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KLF1Q13351 362 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GRM3Q14832 879 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NOMO1Q15155 1222 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PLK5Q496M5 336 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HS1BP3Q53T59 392 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC45A4Q5BKX6 768 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF805Q5CZA5 627 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRRT3Q5FWE3 981 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF385CQ66K41 422 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3GQ6DHY5 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3CQ6IPX1 549 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NCEH1Q6PIU2 408 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC36A4Q6YBV0 504 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 USP30Q70CQ3 517 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ERN2Q76MJ5 926 aaKnown RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LPCAT2Q7L5N7 544 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FGD2Q7Z6J4 655 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CDKL3Q8IVW4 592 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TMEFF1Q8IYR6 380 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TBC1D3Q8IZP1 549 aaPredicted RBP5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AADATQ8N5Z0 425 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 COG1Q8WTW3 980 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FBLIM1Q8WUP2 373 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MAIP1Q8WWC4 291 aa5.84□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HTR3CQ8WXA8 447 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms