RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TOM1L1O75674 476 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 ZRANB2O95218 330 aaKnown RBP eCLIP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 GOSR1O95249 250 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 ABL1P00519 1130 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 PENKP01210 267 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MT-ND3P03897 115 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 HKR1P10072 659 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MCF2P10911 925 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 IRF1P10914 325 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TPSB2P20231 275 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 C5AR1P21730 350 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 HNRNPA2B1P22626 353 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 PAX3P23760 479 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 PCSK1P29120 753 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CSF2RBP32927 897 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 DRD3P35462 400 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 STAT6P42226 847 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 NPTX2P47972 431 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 LIMS1P48059 325 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 GTF2BQ00403 316 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CEBPZQ03701 1054 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TYRO3Q06418 890 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SRSF4Q08170 494 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MAPK7Q13164 816 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CAPSQ13938 189 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 IQCB1Q15051 598 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 POSTNQ15063 836 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TPSAB1Q15661 275 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 E2F4Q16254 413 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 DEFB121Q5J5C9 76 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 DNTTIP2Q5QJE6 756 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 FAXCQ5TGI0 409 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TCERG1LQ5VWI1 586 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM211Q6ICI0 200 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SLFN12LQ6IEE8 588 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM166AQ6J272 317 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 FBXO38Q6PIJ6 1188 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SHC4Q6S5L8 630 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SARM1Q6SZW1 724 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 NPNTQ6UXI9 565 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 KYAT3Q6YP21 454 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 STXBP4Q6ZWJ1 553 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 USP45Q70EL2 814 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 OTOAQ7RTW8 1153 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF720Q7Z2F6 126 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 KCNK18Q7Z418 384 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CREBRFQ8IUR6 639 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 WDR49Q8IV35 697 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 RASGRP3Q8IV61 690 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC65Q8IXS2 484 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CEP57L1Q8IYX8 460 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 FMR1NBQ8N0W7 255 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 DAW1Q8N136 415 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CFAP52Q8N1V2 620 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SPC24Q8NBT2 197 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM161BQ8NDZ6 487 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 RASSF8Q8NHQ8 419 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MBD3L2Q8NHZ7 208 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM110DQ8TAY7 271 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 DEPTORQ8TB45 409 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 GOLGA5Q8TBA6 731 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 ASAP3Q8TDY4 903 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CACTINQ8WUQ7 758 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SLCO2A1Q92959 643 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 DNAJC19Q96DA6 116 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CLIC6Q96NY7 704 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 GSDMAQ96QA5 445 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TNFRSF13CQ96RJ3 184 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SERINC2Q96SA4 455 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 RBM4BQ9BQ04 359 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 ADPGKQ9BRR6 497 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 RUSC1Q9BVN2 902 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 STRA6Q9BX79 667 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 RSPO3Q9BXY4 272 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MRPL4Q9BYD3 311 aaKnown RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 UBXN6Q9BZV1 441 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 SLC13A1Q9BZW2 595 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC113Q9H0I3 377 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 POLR3FQ9H1D9 316 aaPredicted RBP3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CLSTN2Q9H4D0 955 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 CLEC4EQ9ULY5 219 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 TNFSF13BQ9Y275 285 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 HS3ST3A1Q9Y663 406 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 STYXL1Q9Y6J8 313 aa3.16□□□□□ -1.9
SCARNA13-201ENST00000516672 MED12Q93074 2177 aa3.15□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC169A6NNP5 214 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 POM121CA8CG34 1229 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 O00370 1275 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 PRRG2O14669 202 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 EIF3DO15371 548 aaKnown RBP eCLIP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 POLR2DO15514 142 aaKnown RBP3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 SLC7A4O43246 635 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 COCHO43405 550 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ULK1O75385 1050 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 REM1O75628 298 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 FAM13AO94988 1023 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 RASGRP1O95267 797 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 RASAL1O95294 804 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 ESR1P03372 595 aa3.15□□□□□ -1.91
SCARNA13-201ENST00000516672 CYP11A1P05108 521 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms