RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SMG8Q8ND04 991 aaKnown RBP12.8□□□□□ -0.36
SMAD1-215ENST00000515385 TOR1AIP2Q8NFQ8 470 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 ACER1Q8TDN7 264 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 PROX1Q92786 737 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 C8orf48Q96LL4 319 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 DHRS9Q9BPW9 319 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 KCTD14Q9BQ13 255 aaPredicted RBP12.8□□□□□ -0.36
SMAD1-215ENST00000515385 ELOVL4Q9GZR5 314 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 OSBPL2Q9H1P3 480 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 FAM118AQ9NWS6 357 aa12.8□□□□□ -0.36
SMAD1-215ENST00000515385 MAGED2Q9UNF1 606 aaPredicted RBP12.8□□□□□ -0.36
SMAD1-215ENST00000515385 WBP11Q9Y2W2 641 aaKnown RBP12.8□□□□□ -0.36
SMAD1-215ENST00000515385 FXYD1O00168 92 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 MTSS1O43312 755 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 GAS2O43903 313 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ICMTO60725 284 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 MRPS14O60783 128 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 STMN1P16949 149 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 RPL17P18621 184 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ACVR2AP27037 513 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 HTR1EP28566 365 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 RAP1GAPP47736 663 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 CLK3P49761 638 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 GSK3BP49841 420 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 FKBP1AP62942 108 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 IGBP1P78318 339 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ZNF45Q02386 682 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SEZ6Q53EL9 994 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PNCKQ6P2M8 343 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 LCLAT1Q6UWP7 414 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SLC22A9Q8IVM8 553 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 RIMKLAQ8IXN7 391 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 KIAA1958Q8N8K9 716 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 DNAAF3Q8N9W5 541 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ACVR1CQ8NER5 493 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 OR9I1Q8NGQ6 314 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 FAR1Q8WVX9 515 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 HEXIM2Q96MH2 286 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ZNF300Q96RE9 604 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 TAAR1Q96RJ0 339 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PDCD2LQ9BRP1 358 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 BTBD2Q9BX70 525 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 B3GNT4Q9C0J1 378 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SLIRPQ9GZT3 109 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ALG2Q9H553 416 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 STMN3Q9NZ72 180 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SEPT10Q9P0V9 454 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 CPSF3Q9UKF6 684 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 CENPXA8MT69 81 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 F5H423 210 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 FYNP06241 537 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 HOXC6P09630 235 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 HNRNPLP14866 589 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 IL7RP16871 459 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ABCG1P45844 678 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 TKTL1P51854 596 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 EFNA5P52803 228 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 NDST1P52848 882 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 MRPS15P82914 257 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 FCHO2Q0JRZ9 810 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 FADDQ13158 208 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 NFE2Q16621 373 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 IMPG1Q17R60 797 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 OTUD3Q5T2D3 398 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 UBE2UQ5VVX9 321 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 DESI1Q6ICB0 168 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ZCCHC8Q6NZY4 707 aaKnown RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PLD3Q8IV08 490 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 ZNF567Q8N184 647 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PJA1Q8NG27 643 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 MCFD2Q8NI22 146 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 UBA3Q8TBC4 463 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 NXNL1Q96CM4 212 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 DEPDC7Q96QD5 511 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 KCTD15Q96SI1 283 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 LGMNQ99538 433 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 TOR3AQ9H497 397 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SNTG2Q9NY99 539 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 USE1Q9NZ43 259 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 OSGIN1Q9UJX0 560 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 CAB39Q9Y376 341 aaPredicted RBP12.79□□□□□ -0.36
SMAD1-215ENST00000515385 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 PCDHGA8Q9Y5G5 932 aa12.79□□□□□ -0.36
SMAD1-215ENST00000515385 SLC1A7O00341 560 aa12.78□□□□□ -0.36
SMAD1-215ENST00000515385 GRAP2O75791 330 aa12.78□□□□□ -0.36
SMAD1-215ENST00000515385 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
SMAD1-215ENST00000515385 PKLRP30613 574 aa12.78□□□□□ -0.36
SMAD1-215ENST00000515385 RRM2P31350 389 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms