RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 FZD2Q14332 565 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 SPARCL1Q14515 664 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 TAF1AQ15573 450 aaPredicted RBP14.22□□□□□ -0.13
NUP54-216ENST00000514901 INAVAQ3KP66 663 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 FAXCQ5TGI0 409 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 RAET1GQ6H3X3 334 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 DENND5AQ6IQ26 1287 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 ADAMTSL4Q6UY14 1074 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 SYT10Q6XYQ8 523 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 DBX2Q6ZNG2 339 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 NYAP1Q6ZVC0 841 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 GLT6D1Q7Z4J2 308 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 PLA2G15Q8NCC3 412 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 OR2I1PQ8NGU4 316 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 DTX3LQ8TDB6 740 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 BTN2A2Q8WVV5 523 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 EID2BQ96D98 161 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 CAPZA3Q96KX2 299 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 APOL2Q9BQE5 337 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 TEX101Q9BY14 249 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 EIF2B3Q9NR50 452 aaKnown RBP14.22□□□□□ -0.13
NUP54-216ENST00000514901 SMARCAL1Q9NZC9 954 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 PKP3Q9Y446 797 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 OR1A2Q9Y585 309 aa14.22□□□□□ -0.13
NUP54-216ENST00000514901 CCDC188H7C350 402 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 AP3B1O00203 1094 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 KRT14P02533 472 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 CSF2P04141 144 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 MYCLP1P12525 358 aaPredicted RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 NME1P15531 152 aaKnown RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 LPOP22079 712 aaPredicted RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 PPARDQ03181 441 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 CDH17Q12864 832 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 LAMB3Q13751 1172 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 PUM1Q14671 1186 aaKnown RBP eCLIP14.21□□□□□ -0.13
NUP54-216ENST00000514901 PRAMEF14Q5SWL7 426 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 HENMT1Q5T8I9 393 aaKnown RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 PDPK2PQ6A1A2 396 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 TTC27Q6P3X3 843 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 RFLNAQ6ZTI6 216 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 TTC30BQ8N4P2 665 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 TAB3Q8N5C8 712 aaPredicted RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 GLIS1Q8NBF1 620 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 SCAMP4Q969E2 229 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 FUBP1Q96AE4 644 aaKnown RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 TBATAQ96M53 351 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 WDR92Q96MX6 357 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 PLEKHG4BQ96PX9 1271 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 ZSCAN5AQ9BUG6 496 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 RIOK2Q9BVS4 552 aaKnown RBP14.21□□□□□ -0.13
NUP54-216ENST00000514901 DNAJC28Q9NX36 388 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 DLL3Q9NYJ7 618 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 IL17CQ9P0M4 197 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 PCYOX1Q9UHG3 505 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 CD84Q9UIB8 345 aa14.21□□□□□ -0.13
NUP54-216ENST00000514901 TDRD6O60522 2096 aaKnown RBP14.2□□□□□ -0.14
NUP54-216ENST00000514901 NEMP2A6NFY4 417 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 K7ESM1 405 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 KIF2AO00139 706 aaPredicted RBP14.2□□□□□ -0.14
NUP54-216ENST00000514901 TM4SF5O14894 197 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 AURKAO14965 403 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 FANCGO15287 622 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
NUP54-216ENST00000514901 FLRT2O43155 660 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 USP12O75317 370 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 ECEL1O95672 775 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 APRTP07741 180 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 CD59P13987 128 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 BPIP17213 487 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 JUNDP17535 347 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 EPHA8P29322 1005 aaPredicted RBP14.2□□□□□ -0.14
NUP54-216ENST00000514901 CDK3Q00526 305 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
NUP54-216ENST00000514901 SHBQ15464 509 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 ENPP7Q6UWV6 458 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 PPP1R21Q6ZMI0 780 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 PRUNE1Q86TP1 453 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 HEATR4Q86WZ0 1026 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 TRAM1L1Q8N609 369 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 DNAAF3Q8N9W5 541 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 GPR26Q8NDV2 337 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 SAP25Q8TEE9 199 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 SLCO2A1Q92959 643 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 HIC2Q96JB3 615 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 SPATA16Q9BXB7 569 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 SLC13A1Q9BZW2 595 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 SLC32A1Q9H598 525 aa14.2□□□□□ -0.14
NUP54-216ENST00000514901 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
NUP54-216ENST00000514901 ARID1BQ8NFD5 2236 aaPredicted RBP14.19□□□□□ -0.14
NUP54-216ENST00000514901 TMEM131Q92545 1883 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 RASGRP1O95267 797 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 SOD1P00441 154 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 TNFP01375 233 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 SLC4A1P02730 911 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 TPSB2P20231 275 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 CSRP1P21291 193 aaKnown RBP14.19□□□□□ -0.14
NUP54-216ENST00000514901 GRK6P43250 576 aa14.19□□□□□ -0.14
NUP54-216ENST00000514901 SRP54P61011 504 aaKnown RBP14.19□□□□□ -0.14
NUP54-216ENST00000514901 BASP1P80723 227 aaKnown RBP14.19□□□□□ -0.14
NUP54-216ENST00000514901 SARNPP82979 210 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms