RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DUSP15Q9H1R2 295 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 PLAC1Q9HBJ0 212 aa11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 SAYSD1Q9NPB0 183 aa11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 ZSCAN32Q9NX65 697 aa11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 ZC3H7BQ9UGR2 993 aaKnown RBP11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 MBD1Q9UIS9 605 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 APPL1Q9UKG1 709 aa11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 PCDHGA2Q9Y5H1 932 aa11.95□□□□□ -0.5
PDLIM5-220ENST00000514830 A0A1W2PQU0 124 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 IGLON5A6NGN9 336 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 METTL12A8MUP2 240 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 GAPDHSO14556 408 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 TOR1BO14657 336 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 MMP20O60882 483 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 RPP40O75818 363 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 RECQL5O94762 991 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 SP9P0CG40 484 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 BPIP17213 487 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 PAMP19021 973 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 NMBRP28336 390 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ARCN1P48444 511 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 FNTBP49356 437 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 XIAPP98170 497 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 SEPT6Q14141 434 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 CRYMQ14894 314 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 FASTKD3Q14CZ7 662 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 BRD3Q15059 726 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ANGPT1Q15389 498 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 SETMARQ53H47 684 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ESRP1Q6NXG1 681 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 CASC4Q6P4E1 433 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 TSSK4Q6SA08 328 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 Q6ZVL8 140 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 TRMT10CQ7L0Y3 403 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 LMNTD2Q8IXW0 634 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM174AQ8TBP5 190 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 RLN3Q8WXF3 142 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 FOXJ1Q92949 421 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 CENPTQ96BT3 561 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 CDKN2AIPNLQ96HQ2 116 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ZC3H10Q96K80 434 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 DNAJC1Q96KC8 554 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ZNF778Q96MU6 729 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 KLF6Q99612 283 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ZSCAN5AQ9BUG6 496 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 GPR174Q9BXC1 333 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM83DQ9H4H8 585 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 IL26Q9NPH9 171 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 SMOXQ9NWM0 555 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 CHMP2BQ9UQN3 213 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 KCTD3Q9Y597 815 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 MAD1L1Q9Y6D9 718 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 RPS6KL1Q9Y6S9 549 aa11.94□□□□□ -0.5
PDLIM5-220ENST00000514830 ABCA7Q8IZY2 2146 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 TRBV5-4A0A0C4DH59 114 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 A0A0U1RQS6 177 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 CCDC151A5D8V7 595 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 A8MX80 341 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 LZTS3O60299 673 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 NDUFS2O75306 463 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 BANF1O75531 89 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 HOXC4P09017 264 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM153BP0C7A2 387 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 ARNTP27540 789 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 SPAM1P38567 509 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 ETV3P41162 512 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 PPP2CBP62714 309 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 PPP2CAP67775 309 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 SEMG2Q02383 582 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 SGCGQ13326 291 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 FGL2Q14314 439 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 NAA30Q147X3 362 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 ACOX1Q15067 660 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM153CQ494X1 144 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 GPR33Q49SQ1 333 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 SEL1L3Q68CR1 1132 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 DENND2CQ68D51 928 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 AFTPHQ6ULP2 937 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 UNC5AQ6ZN44 842 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 ASCL5Q7RTU5 278 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 CCDC25Q86WR0 208 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 MREGQ8N565 214 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 TRAM1L1Q8N609 369 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 TP53I13Q8NBR0 393 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 GPR26Q8NDV2 337 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 OR13C4Q8NGS5 318 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 GPR150Q8NGU9 434 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 GSDMBQ8TAX9 411 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 HNRNPLLQ8WVV9 542 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 DNASE2BQ8WZ79 361 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 NUS1Q96E22 293 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 MFSD3Q96ES6 412 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 VPS35Q96QK1 796 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 ABCG8Q9H221 673 aa11.93□□□□□ -0.5
PDLIM5-220ENST00000514830 C6orf106Q9H6K1 298 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms