RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TBL1YQ9BQ87 522 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 ETNK1Q9HBU6 452 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
USP46-209ENST00000514536 LRRK1Q38SD2 2015 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 LAMA1P25391 3075 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 TMEM202A6NGA9 273 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 PSMD3O43242 534 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 SOD1P00441 154 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 HOXC4P09017 264 aaPredicted RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 NME1P15531 152 aaKnown RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 GRK6P43250 576 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 KIAA1024LP59773 190 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 HNRNPKP61978 463 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP46-209ENST00000514536 PPARDQ03181 441 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 ALG11Q2TAA5 492 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 KCTD11Q693B1 232 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 PSAPL1Q6NUJ1 521 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 KANSL1Q7Z3B3 1105 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 HEATR4Q86WZ0 1026 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 HID1Q8IV36 788 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 RBFAQ8N0V3 343 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 EID2Q8N6I1 236 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 GPR26Q8NDV2 337 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 ATL2Q8NHH9 583 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 ACTRT1Q8TDG2 376 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 MAGOHBQ96A72 148 aaKnown RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 LRRC45Q96CN5 670 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 NAP1L3Q99457 506 aaPredicted RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 TEX101Q9BY14 249 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 TCEAL2Q9H3H9 227 aaPredicted RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 BPIFA1Q9NP55 256 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 PHPT1Q9NRX4 125 aaPredicted RBP13.9□□□□□ -0.18
USP46-209ENST00000514536 KCND1Q9NSA2 647 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 HACD3Q9P035 362 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 KLQ9UEF7 1012 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 PCOLCE2Q9UKZ9 415 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 CABIN1Q9Y6J0 2220 aa13.9□□□□□ -0.18
USP46-209ENST00000514536 H3BM21 787 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 PDE2AO00408 941 aaPredicted RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 CES2O00748 559 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 SCAMP1O15126 338 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 BUD23O43709 281 aaKnown RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 CEACAM1P13688 526 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 TCP1P17987 556 aaKnown RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 KELP23276 732 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 TEAD1P28347 426 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 RPL22P35268 128 aaKnown RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 HMGCLP35914 325 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 FDFT1P37268 417 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 SRP54P61011 504 aaKnown RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 CDK3Q00526 305 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 KCTD19Q17RG1 926 aaPredicted RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 PPM1JQ5JR12 505 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 ALS2CLQ60I27 953 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 DENND5AQ6IQ26 1287 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 GLT6D1Q7Z4J2 308 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 PHACTR4Q8IZ21 702 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 TTC30BQ8N4P2 665 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 OR56A4Q8NGH8 313 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 BTN2A2Q8WVV5 523 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 NAPGQ99747 312 aaPredicted RBP13.89□□□□□ -0.19
USP46-209ENST00000514536 SLC13A1Q9BZW2 595 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 PAK5Q9P286 719 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 MOSPD1Q9UJG1 213 aa13.89□□□□□ -0.19
USP46-209ENST00000514536 SPAARA0A1B0GVQ0 90 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 INPP4BO15327 924 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 RASGRP1O95267 797 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 AP2A1O95782 977 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 MYCLP1P12525 358 aaPredicted RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 BPIP17213 487 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 TPH1P17752 444 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 HK3P52790 923 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 MSLNQ13421 630 aaPredicted RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 C1orf61Q13536 156 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 TRIP6Q15654 476 aaKnown RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 INAVAQ3KP66 663 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 PRRT3Q5FWE3 981 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 HENMT1Q5T8I9 393 aaKnown RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 ADAMTSL4Q6UY14 1074 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 LMX1AQ8TE12 382 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 OR1E3Q8WZA6 343 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 HIC2Q96JB3 615 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 SPATA16Q9BXB7 569 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 LRRC40Q9H9A6 602 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 ARNT2Q9HBZ2 717 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 FGF22Q9HCT0 170 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 MRPL40Q9NQ50 206 aaKnown RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 RAB6BQ9NRW1 208 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 RAD18Q9NS91 495 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 IL17CQ9P0M4 197 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 SPASTQ9UBP0 616 aa13.88□□□□□ -0.19
USP46-209ENST00000514536 APOBEC3BQ9UH17 382 aaKnown RBP13.88□□□□□ -0.19
USP46-209ENST00000514536 TMEM98Q9Y2Y6 226 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms