RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 GANCQ8TET4 914 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 ROPN1LQ96C74 230 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PIWIL1Q96J94 861 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TRIM45Q9H8W5 580 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 EIF2B3Q9NR50 452 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 IFT80Q9P2H3 777 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 OGDHLQ9ULD0 1010 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TNPO3Q9Y5L0 923 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MSCO60682 206 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 RNASEH2AO75792 299 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CES1P23141 567 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 GRK3P35626 688 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 SLC26A3P40879 764 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CXCR3P49682 368 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 RPL26P61254 145 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 RHDQ02161 417 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MBTD1Q05BQ5 628 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TP53BP2Q13625 1128 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MED22Q15528 200 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 AP5B1Q2VPB7 878 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 RAB2BQ8WUD1 216 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 LPPQ93052 612 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PPP3R2Q96LZ3 170 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 IGSF9Q9P2J2 1179 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 UBA2Q9UBT2 640 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CDV3Q9UKY7 258 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 H0Y858 1186 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PRRG1O14668 218 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 GPR182O15218 404 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TPD52L2O43399 206 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CAPN1P07384 714 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CLCQ05315 142 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TSNQ15631 228 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 C6orf183Q5T699 404 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 AHSA2Q719I0 299 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 C16orf59Q7L2K0 433 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 FAM126AQ9BYI3 521 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PADI4Q9UM07 663 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TBKBP1A7MCY6 615 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 SIX3O95343 332 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 ZNF182P17025 639 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 IGFBP5P24593 272 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 VGLL4Q14135 290 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 HERC3Q15034 1050 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 ACAP2Q15057 778 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CRY1Q16526 586 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CASP12Q6UXS9 341 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TIFABQ6ZNK6 161 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MARVELD2Q8N4S9 558 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 SMYD1Q8NB12 490 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 KBTBD8Q8NFY9 601 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 HIPK3Q9H422 1215 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 SMPD4Q9NXE4 827 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 LSM7Q9UK45 103 aaKnown RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 GPC6Q9Y625 555 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MYL12BO14950 172 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 SLC22A2O15244 555 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 IMPDH2P12268 514 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 GCAP28676 217 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 AQP1P29972 269 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 CRATP43155 626 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 POLD2P49005 469 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 CDK18Q07002 472 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 TRAP1Q12931 704 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 TRIM32Q13049 653 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 RAB6CQ53S08 254 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 TAS1R3Q7RTX0 852 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 P2RY8Q86VZ1 359 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 AMIGO3Q86WK7 504 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 GATAD2AQ86YP4 633 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 WDTC1Q8N5D0 677 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 PPP1R14BQ96C90 147 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 MLPHQ9BV36 600 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 RAB6CQ9H0N0 254 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 SOX17Q9H6I2 414 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 TLE6Q9H808 572 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 KCNK13Q9HB14 408 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 SUCOQ9UBS9 1254 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 HTRA2O43464 458 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 ZBTB14O43829 449 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 WBP4O75554 376 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 CYBBP04839 570 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 S100A1P23297 94 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 CYP2C18P33260 490 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 ZNF252P-AS1Q0IIN9 211 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 PDCD4Q53EL6 469 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 SPATA19Q7Z5L4 167 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 KRT73Q86Y46 540 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 LEMD2Q8NC56 503 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 PDPRQ8NCN5 879 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 OR10A6Q8NH74 314 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 RSPH1Q8WYR4 309 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 ISOC1Q96CN7 298 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 RBM4BQ9BQ04 359 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 RBM4Q9BWF3 364 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 TPK1Q9H3S4 243 aa7.73□□□□□ -1.17
CLCN3-209ENST00000513761 AGO3Q9H9G7 860 aaKnown RBP7.73□□□□□ -1.17
CLCN3-209ENST00000513761 USP29Q9HBJ7 922 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms