RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NR1D1P20393 614 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
SPCS3-204ENST00000513139 MMP8P22894 467 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
SPCS3-204ENST00000513139 TEAD1P28347 426 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 ADCY8P40145 1251 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 UQCRFS1P47985 274 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 CDK3Q00526 305 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 NSUN2Q08J23 767 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPCS3-204ENST00000513139 KRT31Q15323 416 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 MIIPQ5JXC2 388 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 ATP1A1-AS1Q5TC04 95 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 DPY19L2P1Q6NXN4 242 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 RNF214Q8ND24 703 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 FAM172AQ8WUF8 416 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 NUS1Q96E22 293 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 SCARF2Q96GP6 870 aaPredicted RBP13.87□□□□□ -0.19
SPCS3-204ENST00000513139 CTRCQ99895 268 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 ZMYND15Q9H091 742 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 VPS16Q9H269 839 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 LRRC19Q9H756 370 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 POLHQ9Y253 713 aa13.87□□□□□ -0.19
SPCS3-204ENST00000513139 J3KR12 359 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 K7EM74 188 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 TRAFD1O14545 582 aaPredicted RBP13.86□□□□□ -0.19
SPCS3-204ENST00000513139 FGF10O15520 208 aaPredicted RBP13.86□□□□□ -0.19
SPCS3-204ENST00000513139 MAP3K7O43318 606 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 RFPL1O75677 317 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 DDAH2O95865 285 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 RECKO95980 971 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 GNLYP22749 145 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 ACTR1BP42025 376 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 RGRP47804 291 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 NDST2P52849 883 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 ACTR1AP61163 376 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 MAN2A1Q16706 1144 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 VWA3BQ502W6 1294 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 NOP9Q86U38 636 aaKnown RBP13.86□□□□□ -0.19
SPCS3-204ENST00000513139 ZNF677Q86XU0 584 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 PYROXD2Q8N2H3 581 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 CBARPQ8N350 705 aaPredicted RBP13.86□□□□□ -0.19
SPCS3-204ENST00000513139 TSEN2Q8NCE0 465 aaKnown RBP13.86□□□□□ -0.19
SPCS3-204ENST00000513139 JOSD2Q8TAC2 188 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 EPS8L1Q8TE68 723 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 SLC38A3Q99624 504 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 SUDS3Q9H7L9 328 aaPredicted RBP13.86□□□□□ -0.19
SPCS3-204ENST00000513139 RPS6KL1Q9Y6S9 549 aa13.86□□□□□ -0.19
SPCS3-204ENST00000513139 A0A1W2PQ67 120 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 FAM170AA1A519 330 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 TTLL8A6PVC2 850 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 A8MU76 341 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
SPCS3-204ENST00000513139 POLR1CO15160 346 aaPredicted RBP13.85□□□□□ -0.19
SPCS3-204ENST00000513139 PALMO75781 387 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 MMEP08473 750 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 HTR7P34969 479 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 AIF1P55008 147 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.85□□□□□ -0.19
SPCS3-204ENST00000513139 APTXQ7Z2E3 356 aaKnown RBP13.85□□□□□ -0.19
SPCS3-204ENST00000513139 PHLDB2Q86SQ0 1253 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 GAS2L3Q86XJ1 694 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 SFRP1Q8N474 314 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 CPT1CQ8TCG5 803 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 SLC37A2Q8TED4 501 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 DTD2Q96FN9 168 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 APMAPQ9HDC9 416 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 B4GALT6Q9UBX8 382 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 LIMA1Q9UHB6 759 aaKnown RBP13.85□□□□□ -0.19
SPCS3-204ENST00000513139 PCDHGA10Q9Y5H3 936 aa13.85□□□□□ -0.19
SPCS3-204ENST00000513139 MRPS18BQ9Y676 258 aaKnown RBP13.85□□□□□ -0.19
SPCS3-204ENST00000513139 ARHGAP42A6NI28 874 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 LRRC10BA6NIK2 292 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 A8MX80 341 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 CREB3O43889 395 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 CYP1A1P04798 512 aaPredicted RBP13.84□□□□□ -0.19
SPCS3-204ENST00000513139 KRT3P12035 628 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 F8A1P23610 371 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 NFKBIAP25963 317 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
SPCS3-204ENST00000513139 POLD2P49005 469 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 PMS2P54278 862 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 EPHA4P54764 986 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 GSCP56915 257 aaPredicted RBP13.84□□□□□ -0.19
SPCS3-204ENST00000513139 AP1S1P61966 158 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 LRP8Q14114 963 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 RFTN1Q14699 578 aaPredicted RBP13.84□□□□□ -0.19
SPCS3-204ENST00000513139 CNGA3Q16281 694 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 SNAP47Q5SQN1 464 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 APLFQ8IW19 511 aaPredicted RBP13.84□□□□□ -0.19
SPCS3-204ENST00000513139 OR2M4Q96R27 311 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
SPCS3-204ENST00000513139 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 TLK1Q9UKI8 766 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 FHOD1Q9Y613 1164 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms