RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SIRPGQ9P1W8 387 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 BTBD7Q9P203 1132 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 DAPK2Q9UIK4 370 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 IKZF3Q9UKT9 509 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 IFT52Q9Y366 437 aa5.78□□□□□ -1.48
USP38-203ENST00000511739 LRP6O75581 1613 aa5.77□□□□□ -1.48
USP38-203ENST00000511739 BAZ2BQ9UIF8 2168 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 PKD1L3Q7Z443 1732 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 A0A0J9YVX5 310 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 TRIM64BA6NI03 449 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 OR7A10O76100 309 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 OTCP00480 354 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 KLK3P07288 261 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 CCNB1P14635 433 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 FAUP35544 74 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 NAA20P61599 178 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 RASGEF1BQ0VAM2 473 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 NAB1Q13506 487 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ACAP1Q15027 740 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 APOBEC3HQ6NTF7 200 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 PTCD2Q8WV60 388 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 COPS5Q92905 334 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 PANX1Q96RD7 426 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 NRDE2Q9H7Z3 1164 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 FBXO6Q9NRD1 293 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 TMPRSS4Q9NRS4 437 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 EHD3Q9NZN3 535 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 XPR1Q9UBH6 696 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 SPEF1Q9Y4P9 236 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 HES2Q9Y543 173 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ZNF536O15090 1300 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ENO4A6NNW6 628 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 PLIN3O60664 434 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 PEX11AO75192 247 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 FKBP6O75344 327 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CLPTM1O96005 669 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 JMJD7P0C870 316 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 RARRES1P49788 294 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CDK7P50613 346 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MECP2P51608 486 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 MC1RQ01726 317 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CHRDL2Q6WN34 429 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 UBE2R2Q712K3 238 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 HIPK1Q86Z02 1210 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 LRRC34Q8IZ02 419 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MCOLN2Q8IZK6 566 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 OR2AJ1Q8NGZ0 328 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CKAP2Q8WWK9 683 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MYO19Q96H55 970 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MAF1Q9H063 256 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 DUSP10Q9Y6W6 482 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 TTC34A8MYJ7 566 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 TMEM150CB9EJG8 249 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 UGT2B4P06133 528 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 PIRTP0C851 137 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 FAM228BP0C875 321 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 LRPAP1P30533 357 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 DGCR6Q14129 220 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 GFOD2Q3B7J2 385 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 RFTN2Q52LD8 501 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 EARS2Q5JPH6 523 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 CCNYL2Q5T2Q4 361 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 SLC9A4Q6AI14 798 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CCSAPQ6IQ19 270 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 TMPRSS11BQ86T26 416 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 WDR60Q8WVS4 1066 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 TNFRSF25Q93038 417 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 TMEM125Q96AQ2 219 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 OSBPL2Q9H1P3 480 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ARHGEF4Q9NR80 690 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 THAP1Q9NVV9 213 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 GLS2Q9UI32 602 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CASZ1Q86V15 1759 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 SERPINA3P01011 423 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ZNF823P16415 610 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ZNF37AP17032 561 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 ALDH4A1P30038 563 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MIPP30301 263 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CSTF2P33240 577 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP38-203ENST00000511739 EIF2S3P41091 472 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 CLCN5P51795 746 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 RPS6KA3P51812 740 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 AP1S1P61966 158 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 DDR1Q08345 913 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MAPK14Q16539 360 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 MTDHQ86UE4 582 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 ZNF227Q86WZ6 799 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CST11Q9H112 138 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CDC42EP4Q9H3Q1 356 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 SEMA6BQ9H3T3 888 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 SGK2Q9HBY8 427 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 OSER1Q9NX31 292 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 CAPN14A8MX76 684 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 STBD1O95210 358 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 FAM58BPP0C7Q3 252 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ARF3P61204 181 aaPredicted RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 PPP3R1P63098 170 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 ARF1P84077 181 aaKnown RBP5.77□□□□□ -1.49
USP38-203ENST00000511739 SLC13A2Q13183 592 aa5.77□□□□□ -1.49
USP38-203ENST00000511739 RAB30Q15771 203 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms