RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KIR2DS5A0A0G2JLQ3 304 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CXorf65A6NEN9 183 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 F8W810 466 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 KIR2DS3K7RE56 304 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 SNAP23O00161 211 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 EYA2O00167 538 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 ADAM10O14672 748 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CAPN9O14815 690 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CCNT1O60563 726 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 UGDHO60701 494 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 ENTPD3O75355 529 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CSPG5O95196 566 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 NFATC1O95644 943 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 AGR2O95994 175 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 HLA-DQA2P01906 255 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 MMP1P03956 469 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 RB1P06400 928 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CPA1P15085 419 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 GSTM2P28161 218 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 TYK2P29597 1187 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 STAT1P42224 750 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 POU5F1BQ06416 359 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 GALNT3Q14435 633 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 PLK5Q496M5 336 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 WDR45BQ5MNZ6 344 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CXCL17Q6UXB2 119 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 LRIG3Q6UXM1 1119 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 RNF144BQ7Z419 303 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 TMTC1Q8IUR5 882 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 ZBTB44Q8NCP5 570 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CCDC191Q8NCU4 936 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 LSM14AQ8ND56 463 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 MARK4Q96L34 752 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 YME1L1Q96TA2 773 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 TUBB6Q9BUF5 446 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 FRMD8Q9BZ67 464 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 ALDH8A1Q9H2A2 487 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 TMEM45AQ9NWC5 275 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 SLC13A4Q9UKG4 626 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 AGO2Q9UKV8 859 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 ZHX1Q9UKY1 873 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CRYL1Q9Y2S2 319 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 GDAQ9Y2T3 454 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 CFAP46Q8IYW2 2715 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 DMXL2Q8TDJ6 3036 aa3.79□□□□□ -1.8
TOPBP1-208ENST00000511439 MROH5Q6ZUA9 1318 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 LY6G6EA0A0G2JKS1 128 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 TCRBV7S3A2A0A539 114 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 DPPA5A6NC42 116 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 C17orf100A8MU93 164 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 C2CD4DB7Z1M9 353 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 C5orf67F2Z3F1 127 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 SYN3O14994 580 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 PRPF4O43172 522 aaKnown RBP eCLIP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 KLK10O43240 276 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 MSI1O43347 362 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 TLX3O43711 291 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 FRAT2O75474 233 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 NEURL1O76050 574 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 LCKP06239 509 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 DCNP07585 359 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 GP1BBP13224 206 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 PRKAR2BP31323 418 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 VAMP2P63027 116 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 TRPC3Q13507 836 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 ATG16L1Q676U5 607 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 ISM2Q6H9L7 571 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 CCDC70Q6NSX1 233 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 AADACL2Q6P093 401 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 CYB5R4Q7L1T6 521 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 ANKRD13BQ86YJ7 626 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 BRSK2Q8IWQ3 736 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 MAML2Q8IZL2 1156 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 TDRD5Q8NAT2 981 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 RNFT2Q96EX2 444 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 EIF2AK1Q9BQI3 630 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 MOV10L1Q9BXT6 1211 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 CADM1Q9BY67 442 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 CTDSP1Q9GZU7 261 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 MROH8Q9H579 483 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 STN1Q9H668 368 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 ACAD9Q9H845 621 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 TBC1D17Q9HA65 648 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 WASH6PQ9NQA3 447 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 POT1Q9NUX5 634 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 CWC25Q9NXE8 425 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 IFT80Q9P2H3 777 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 UTS2RQ9UKP6 389 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 DUSP12Q9UNI6 340 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 LAMP3Q9UQV4 416 aa3.78□□□□□ -1.8
TOPBP1-208ENST00000511439 FREM2Q5SZK8 3169 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 ZMYM2Q9UBW7 1377 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 GRIN2DO15399 1336 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 SCN5AQ14524 2016 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 A0A0G2JK05 382 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 TMEM247A6NEH6 219 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 DDTLA6NHG4 134 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 FOXO6A8MYZ6 492 aa3.77□□□□□ -1.81
TOPBP1-208ENST00000511439 RHODO00212 210 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms