RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	PRKCZ	Q05513	592 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	AIMP1	Q12904	312 aa	Known RBP	4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	ARHGEF6	Q15052	776 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	SHB	Q15464	509 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	SHH	Q15465	462 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	ADCK5	Q3MIX3	580 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	FBXO43	Q4G163	708 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	PALB2	Q86YC2	1186 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	TMC8	Q8IU68	726 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	ANKRD44	Q8N8A2	993 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	SPATA5	Q8NB90	893 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	CEP70	Q8NHQ1	597 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	RAET1E	Q8TD07	263 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	CCT6B	Q92526	530 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	CTAGE1	Q96RT6	745 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	MXD3	Q9BW11	206 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	KRTAP2-2	Q9BYT5	123 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	USP44	Q9H0E7	712 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	CWC25	Q9NXE8	425 aa	Predicted RBP	4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	FAM208B	Q5VWN6	2430 aa		4.28	□□□□□ -1.72
NFKB1-208	ENST00000509165	MYO15A	Q9UKN7	3530 aa		4.28	□□□□□ -1.73
NFKB1-208	ENST00000509165	MAST2	Q6P0Q8	1798 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM205A	Q6ZU69	1335 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	CCL15-CCL14	A0A0B4J2E2	113 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM90A7P	A6NKC0	464 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM90A22P	A8MWA6	464 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM90A12P	A8MX19	464 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM90A23P	A8MXZ1	464 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	VWA5A	O00534	786 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	IRAK2	O43187	625 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	CBX6	O95503	412 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	MMP3	P08254	477 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	CD72	P21854	359 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	YWHAQ	P27348	245 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	NF2	P35240	595 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	RFC1	P35251	1148 aa	Predicted RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	PRMT2	P55345	433 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	KCTD2	Q14681	263 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	CCL15	Q16663	113 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	ME3	Q16798	604 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	LRRC26	Q2I0M4	334 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FSCB	Q5H9T9	825 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	FBXO47	Q5MNV8	452 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	C17orf99	Q6UX52	265 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	ATF7IP	Q6VMQ6	1270 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	TWNK	Q96RR1	684 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	MEIS3	Q99687	375 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	MSTO1	Q9BUK6	570 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	NPL	Q9BXD5	320 aa	Predicted RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	API5	Q9BZZ5	524 aa	Known RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	MVB12B	Q9H7P6	319 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	WDR6	Q9NNW5	1121 aa	Known RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	CD93	Q9NPY3	652 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	SMC4	Q9NTJ3	1288 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	IL36RN	Q9UBH0	155 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	TRMT112	Q9UI30	125 aa	Known RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	GPR52	Q9Y2T5	361 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	DMD	P11532	3685 aa		4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	GCN1	Q92616	2671 aa	Known RBP	4.27	□□□□□ -1.73
NFKB1-208	ENST00000509165	LRRC37A2	A6NM11	1700 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	PLXNA1	Q9UIW2	1896 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	ECM29	Q5VYK3	1845 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	VWA3A	A6NCI4	1184 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	IFRD1	O00458	451 aa	Predicted RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	GLUD1	P00367	558 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	ADA	P00813	363 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	SERPINC1	P01008	464 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	DCTD	P32321	178 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	HAL	P42357	657 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	GLUD2	P49448	558 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	DSCR9	P59020	149 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	UBXN2A	P68543	259 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	SLC18A2	Q05940	514 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	DSC1	Q08554	894 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	NEXN	Q0ZGT2	675 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	TRAF3	Q13114	568 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	GRAP	Q13588	217 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	KEAP1	Q14145	624 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	SLC18A3	Q16572	532 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	TDRD12	Q587J7	1177 aa	Known RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	ATG9B	Q674R7	924 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	LDHAL6A	Q6ZMR3	332 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	C15orf52	Q6ZUT6	534 aa	Known RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	CLIP4	Q8N3C7	705 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	AGBL3	Q8NEM8	1001 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	GRAPL	Q8TC17	118 aa	Predicted RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	GPT2	Q8TD30	523 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	NUDCD2	Q8WVJ2	157 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	ATOH1	Q92858	354 aa	Predicted RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	TMEM18	Q96B42	140 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	OPTN	Q96CV9	577 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	COG8	Q96MW5	612 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	SEZ6L	Q9BYH1	1024 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	NPFFR1	Q9GZQ6	430 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	LHPP	Q9H008	270 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms