RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TMEM114B3SHH9 223 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TCP11X1B4DZS4 312 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 E7EWF7 191 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 H0YC42 278 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 GOLGA8MH3BSY2 632 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CAPN9O14815 690 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 KMOO15229 486 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SLC22A1O15245 554 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MAGEB2O15479 319 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 INSIG1O15503 277 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 RAD51CO43502 376 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MAGEC1O60732 1142 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SPAG7O75391 227 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SERPINB7O75635 380 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TCEA3O75764 348 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 DDX58O95786 925 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CLPTM1O96005 669 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 APOEP02649 317 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FGAP02671 866 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 HMOX1P09601 288 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SNHG28P0DPA3 235 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 RARGP13631 454 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FDPSP14324 419 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NPR1P16066 1061 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 RXRAP19793 462 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 M6PRP20645 277 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CDC25CP30307 473 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 HMOX2P30519 316 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MAN1A1P33908 653 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TRAPPC10P48553 1259 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TUBP50607 506 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TPD52P55327 224 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 HUNKP57058 714 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 BASP1P80723 227 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 RELAQ04206 551 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 LRRC63Q05C16 580 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NSUN2Q08J23 767 aaKnown RBP eCLIP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 DNAJC3Q13217 504 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CTBP1Q13363 440 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MSLNQ13421 630 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 EIF4A2Q14240 407 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 PTK2BQ14289 1009 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 KRT81Q14533 505 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MLC1Q15049 377 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NAB2Q15742 525 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CNGA2Q16280 664 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 ARL13BQ3SXY8 428 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 COBLL1Q53SF7 1204 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TNFAIP8L3Q5GJ75 292 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 HERC4Q5GLZ8 1057 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 RRAGBQ5VZM2 374 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM91A1Q658Y4 838 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NFRKBQ6P4R8 1299 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 LRRC8BQ6P9F7 803 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF449Q6P9G9 518 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TTC23LQ6PF05 361 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 WDR59Q6PJI9 974 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF783Q6ZMS7 281 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CENPUQ71F23 418 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MRPL10Q7Z7H8 261 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FOXP4Q8IVH2 680 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 WDR75Q8IWA0 830 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MPP5Q8N3R9 675 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SRBD1Q8N5C6 995 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 KBTBD3Q8NAB2 608 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TNIP2Q8NFZ5 429 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 C16orf52Q8NHV5 167 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 SCFD2Q8WU76 684 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NELFBQ8WX92 580 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 STARD8Q92502 1023 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 CCDC17Q96LX7 622 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NT5C1BQ96P26 610 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FYTTD1Q96QD9 318 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TGS1Q96RS0 853 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FNBP1Q96RU3 617 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 PRPF18Q99633 342 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 ECSITQ9BQ95 431 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 BTBD10Q9BSF8 475 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TBC1D10AQ9BXI6 508 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TRIM54Q9BYV2 358 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 PITPNM3Q9BZ71 974 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 LRRC27Q9C0I9 530 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 NDEL1Q9GZM8 345 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MS4A7Q9GZW8 240 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 GBA2Q9HCG7 927 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 VPS45Q9NRW7 570 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 TYW1Q9NV66 732 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FKBP14Q9NWM8 211 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MTMR4Q9NYA4 1195 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 LPAR3Q9UBY5 353 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 LRWD1Q9UFC0 647 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 RSL24D1Q9UHA3 163 aaKnown RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM153AQ9UHL3 310 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF180Q9UJW8 692 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 FBXO2Q9UK22 296 aaPredicted RBP4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 GTF3C4Q9UKN8 822 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 PNMA2Q9UL42 364 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 B3GNT3Q9Y2A9 372 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MYH7P12883 1935 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 MYH14Q7Z406 1995 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms